Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 184 a.a., ribosomal RNA small subunit methyltransferase D from Phaeobacter inhibens DSM 17395

 Score = 93.6 bits (231), Expect = 2e-24
 Identities = 72/186 (38%), Positives = 102/186 (54%), Gaps = 11/186 (5%)

Query: 21  LRIIGGEWGSRKLSFP---DAPG-LRPTPDRVRETLFNWLAPYVA--GAKVLDPFAGSGA 74
           +RII G++  R L+     DA   LRPT DRVRE+LFN L+  V   G +VLD FAG+GA
Sbjct: 1   MRIIAGDFRGRALTSVGKGDAGAHLRPTTDRVRESLFNVLSHLVDFDGLRVLDLFAGTGA 60

Query: 75  LFLEALSRGAAMGQALDASNIAVASIKEHLGTLRC-TTGQVQTADALRYLETQPATAFDL 133
           L LEALSRGAA    +D   ++   I +++  LR     ++   DA R L        D+
Sbjct: 61  LGLEALSRGAAEAVFVDDGRVSQGLITKNIDLLRIKDRARLIRRDATR-LPVNEGAPCDV 119

Query: 134 VFLDPPFNQNLLPAVCTLLEERHWLSDDAWVYTESETAPSILGLPENWRLHREQKSGRVY 193
           +FLDPP+ ++L         +  WL++DA V  E E++P  +  PE + LH  +K G  +
Sbjct: 120 IFLDPPYGKSLGQKALAAATKGGWLAEDALVVWE-ESSP--MQPPEGFTLHDSRKYGDTH 176

Query: 194 YALWQR 199
             L  R
Sbjct: 177 VTLLWR 182