Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 216 a.a., conserved hypothetical protein from Marinobacter adhaerens HP15

 Score =  176 bits (445), Expect = 4e-49
 Identities = 86/183 (46%), Positives = 121/183 (66%)

Query: 16  NGVNQLRIIGGEWGSRKLSFPDAPGLRPTPDRVRETLFNWLAPYVAGAKVLDPFAGSGAL 75
           +G  +LRIIGG+W SRKL FPDA G+RPTP R RETLFNWLA ++AG+  LD FAGSGAL
Sbjct: 28  SGTGELRIIGGDWRSRKLRFPDAGGVRPTPARTRETLFNWLAFHLAGSDCLDLFAGSGAL 87

Query: 76  FLEALSRGAAMGQALDASNIAVASIKEHLGTLRCTTGQVQTADALRYLETQPATAFDLVF 135
            LEALSRGA     +D +     +++++L  L+   G+V  +D   YL  +    FD+VF
Sbjct: 88  GLEALSRGAGQATLVDHTPALARALRDNLRLLKSDNGEVVCSDVESYLAQRNRPPFDIVF 147

Query: 136 LDPPFNQNLLPAVCTLLEERHWLSDDAWVYTESETAPSILGLPENWRLHREQKSGRVYYA 195
           +DPPF Q  L  +  LLE++ W+    WVY E E+      +P +W+LHR++ +G+V Y+
Sbjct: 148 MDPPFRQGWLEKLFPLLEQQAWIKPGGWVYMEHESELPPPSVPVSWQLHRQKSAGQVTYS 207

Query: 196 LWQ 198
           L++
Sbjct: 208 LFR 210