Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 190 a.a., methyltransferase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 92.8 bits (229), Expect = 4e-24
 Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 5/154 (3%)

Query: 21  LRIIGGEWGSRKLSFPDAPGLRPTPDRVRETLFNWLAP---YVAGAKVLDPFAGSGALFL 77
           +RII G +G R L   + PG RP   RVRE+LF+ L+      AG++VLD FAGSG+L  
Sbjct: 1   MRIIAGAYGGRLLKTVEGPGYRPAMSRVRESLFSMLSSRGVVWAGSRVLDLFAGSGSLAF 60

Query: 78  EALSRGAAMGQALDASNIAVASIKEHLGTL--RCTTGQVQTADALRYLETQPATAFDLVF 135
           EALSRGA     ++ +  A A I+++  +L       +V   D  + L  + A  FD+VF
Sbjct: 61  EALSRGADEAWFVELNAKAAACIEKNATSLGIEPQRWRVLAEDITKVLGRRAAAPFDVVF 120

Query: 136 LDPPFNQNLLPAVCTLLEERHWLSDDAWVYTESE 169
           +DPP+ +  L     L+    WL+ +  V  E E
Sbjct: 121 IDPPYGEGRLAPTIRLMMRSRWLAPEGVVVAEVE 154