Pairwise Alignments

Query, 205 a.a., Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 177 a.a., putative methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.4 bits (137), Expect = 2e-13
 Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 10/146 (6%)

Query: 21  LRIIGGEWGSRKLSFPDAPGLRPTPDRVRETLFNWLAPYV---AGAKVLDPFAGSGALFL 77
           +R+I G +  R+   P     RPT D  +E LFN L  Y+    G   LD FAG+G++ +
Sbjct: 1   MRVISGIYKRRRFDVPRTFKARPTTDFAKENLFNVLNNYIDFEEGVTALDLFAGTGSISI 60

Query: 78  EALSRGAAMGQALD---ASNIAVASIKEHLGTLRCTTGQVQTADALRYLETQPATAFDLV 134
           E +SRG     +++   A +  +  I + + T +C   +    D  +++ +     FD +
Sbjct: 61  ELVSRGCDRVISVEKDPAHHSFICKIMKEVQTDKCLPIR---GDVFKFINS-GREQFDFI 116

Query: 135 FLDPPFNQNLLPAVCTLLEERHWLSD 160
           F DPP+    L ++  L+ + + L +
Sbjct: 117 FADPPYALKELESIPELIFKNNLLKE 142