Pairwise Alignments

Query, 287 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 315 a.a., RuBisCO transcriptional regulator cbbR, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  118 bits (296), Expect = 1e-31
 Identities = 82/271 (30%), Positives = 146/271 (53%), Gaps = 7/271 (2%)

Query: 5   ELKAFYMVARLGSITLAAKKLGLSQPTVTTQIRHLESQYSVELFYRGGRRLSVSDEGARL 64
           +++ F  VAR  S + AA++LGL+QP V+ QI+ +E+   + LF + GR L ++  G  L
Sbjct: 8   QMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAGTIL 67

Query: 65  LPMVKALLQQEADIEFFLRN-SGQVQGTLRIA--ATAPYYILDLVKTFRERLPQVEVSVE 121
           L  V+ +L    D +  +    G+  G LRI   +TA Y+   L+  F    P VE+ + 
Sbjct: 68  LGHVRTILAAVTDADKAMDALKGKRAGALRIGVVSTAKYFAPRLLSVFTAGYPGVELGLT 127

Query: 122 IGNSQQVLEALEDYRVDVAASSQLLDDARLIRRVLGSDPLVLAVHRNHPLAVHDHVPLSA 181
           + N +Q+L  +++  +D+    +   +  +       +P+V+    +HPL V   +    
Sbjct: 128 VANREQILGMIQENALDLFIMGRPPTEPAVRAERFAPNPMVMVAASDHPL-VRRKLTFHD 186

Query: 182 LAGHTLLMRESGSTTRRLTEELLAGAGVSFGPLLEIGSRESIREAVLRNIGISIIARQEV 241
           L+G T LMRE GS TR L E+L+   GV    ++E+ S E+I++AV+  +GIS+++R  +
Sbjct: 187 LSGETFLMREPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMAGMGISLLSRNTM 246

Query: 242 PHD---PQLRVLTLENAPQIPEYLYCLKERK 269
             +    +L +L +E  P   ++   ++E K
Sbjct: 247 SLELSVGRLVILDVEGLPIQRDWYVVIREGK 277