Pairwise Alignments

Query, 287 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (305), Expect = 1e-32
 Identities = 84/270 (31%), Positives = 136/270 (50%), Gaps = 8/270 (2%)

Query: 16  GSITLAAKKLGLSQPTVTTQIRHLESQYSVELFYRGGRRLSVSDEGARLLPMVKALLQQE 75
           GS++ AA+ L L+QPT++ Q++ L       L+   GR++  ++ G  ++     +L   
Sbjct: 25  GSVSGAAETLHLTQPTISMQLKKLADVIGFPLYNIVGRKVVFTEAGLEVVKSATEILDSF 84

Query: 76  ADIEFFLRNSGQVQ-GTLRIAA--TAPYYILDLVKTFRERLPQVEVSVEIGNSQQVLEAL 132
           A +E  L + G+++ GTLR+A   T+ Y+I  L+  F ER P V V + +GN QQ++E L
Sbjct: 85  ARLEMSLSDMGELKSGTLRLAVVTTSKYFIPHLLGPFCERYPNVAVQLNVGNRQQIIERL 144

Query: 133 EDYRVDVAASSQLLDDARLIRRVLGSDPLVLAVHRNHPLAVHDHVPLSALAGHTLLMRES 192
           +    D    S    D         ++PLV     NHPL   D V L+ L     LMRE+
Sbjct: 145 KQGIDDFYVFSHPPADLNTDSIEFFNNPLVAIAQENHPLVSQDGVSLAELCDAPFLMREN 204

Query: 193 GSTTRRLTEELLAGAGVSFGPLLEIGSRESIREAVLRNIGISIIARQEVPHDPQLRVLTL 252
           GS TR   E  +A  GV     + I S E+I+ +V+  +G+SI++   +       +  L
Sbjct: 205 GSGTRLAIERFMAKQGVKLNVKMTIESNEAIKHSVMSGLGVSILSAHTLAFGGNTGLAQL 264

Query: 253 ENAPQIP----EYLYCLKERKGARLPAAFL 278
            N  ++P     Y   LK ++ + +  AFL
Sbjct: 265 -NVKELPINSNWYFLWLKSKRPSAIAQAFL 293