Pairwise Alignments

Query, 466 a.a., TPR domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 466 a.a., TPR repeat-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  119 bits (298), Expect = 2e-31
 Identities = 108/448 (24%), Positives = 189/448 (42%), Gaps = 59/448 (13%)

Query: 8   SLLLSLALQLTGCA---AYRDYDLELEQTTAQLKAGNPQGALQLLELHNPSEERDLLYYF 64
           +L+L+  L  +GCA    + +Y  ++     QL    P   +  L   N      LLY  
Sbjct: 16  TLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKLA-SNIQGNDGLLYAQ 74

Query: 65  EKGAVLSAGGALPQSQVAWRSAEQMVIQRQDTVESAGTQLLSAMGDHWGSIINDKLRRYD 124
           E G V    G    S+  ++ A +      D  + + + + +        ++ND    Y 
Sbjct: 75  EAGRVAQVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATS---LVLNDNAIPYR 131

Query: 125 GYDYEKVMLTTQMALNQLAVNDFDGARADIKKTHEREALIARQREKEYERLEEEAKAQGV 184
           G  YE++ML    ALN L   D+ GA  ++++++E +         E ER ++  K+   
Sbjct: 132 GPGYERIMLHQYQALNYLFSGDYQGALVEVRRSNELQG-------SEQERYQKSQKS--- 181

Query: 185 RVHYKDLQGYPVMTLDA------PAVIALKNGYQSAFSHYLAGFTYEALGERDLAAPGYR 238
                 +Q     T+DA       A   + + + +A+S+Y  G  +E LGE + A   YR
Sbjct: 182 ------VQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDAFIDYR 235

Query: 239 QAIELRPDLPFFEQALREL-----------------DKPAAKANESDVLVIVQSGLAPAR 281
           +A ++ PD  + +Q L  L                 D    KA E  V+++V+ G  P +
Sbjct: 236 KAAQITPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKGFVPEK 295

Query: 282 SSVRVPYPVRLEDNQVIVANVSFPVMVPDTSTPAFTQMTIDGRKQQLTLVNSITDMSLRT 341
            ++ VP+ +      V +A        P+ S  A  Q+   G   +   + +I  +++  
Sbjct: 296 QALTVPFTIHGNWQTVSLATYG-----PNNSFVAEAQVQGLGSVLKTEPIANIDALAINA 350

Query: 342 LRDDMPGIIQRTAHRAY----LAASVQAT----DNRRDPSKASYVTQHDDFEHADTRTWR 393
           L++D+PG + R   R Y    +A  V+ +    +N  D    +    +   E AD R+W 
Sbjct: 351 LKEDLPGTLVRQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVVTEQADRRSWL 410

Query: 394 TLPNITLVARLRLKKGEHLISLPNAPGA 421
           TLP    + R  L  G++ + L  AP A
Sbjct: 411 TLPKQAQIGRRYLNPGQYTLQLDKAPPA 438