Pairwise Alignments

Query, 464 a.a., TPR domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 459 a.a., TPR domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  160 bits (405), Expect = 8e-44
 Identities = 132/438 (30%), Positives = 206/438 (47%), Gaps = 38/438 (8%)

Query: 1   MAFRAPALIALSAVTLLSGCSA---FRNYDSELAQTNQQLASGNVEAALTLLEKNNTGKD 57
           M+ RAP L+       L GC+    F +Y +++AQ  Q L+     + LT +    +GKD
Sbjct: 1   MSQRAPVLMT---ALFLGGCAMGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKD 57

Query: 58  KDLLYYFEKGELLRAKGDLSGSQNAWTSADQVVGKWEDAVKLDTDKYLAQFGSFLVNDKV 117
             LLY  E G + +  GD   SQ+ + SA     K++D   +      A  GS ++ND V
Sbjct: 58  -GLLYAQEAGRVAQIGGDFKASQDYYRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNV 116

Query: 118 RRYEGYDYEKVMLTTQMALNLLAVNDFDGARTAIKKTHEREAVIADLRDKEYLKSEEQAE 177
             Y G  +E+VML    ALN L   DF+GA   +++ +E +A       K Y KS     
Sbjct: 117 IPYRGPGFERVMLHQYQALNYLIQYDFEGALVEVRRANELQA----QEQKRYEKS----- 167

Query: 178 KEGVKTQYKDLQGYPVASLDAPEVVSLKNSYQSAFSHYLAGFVYEALGEKDLAAPGYRKA 237
           KE VK          +  L+  +   + +S+ +A+S+Y  G ++E LGE++ A   YRKA
Sbjct: 168 KESVKAMANGTVDSEINRLE-QQAGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKA 226

Query: 238 VELRPNTPLLEQALVNLDKP-AKSDDSDILIVVQSGLAPSRDSIRIPLPLPISNNVVITP 296
            ++ P  P LEQ LV L K  A     +        + P +   ++ L L     +   P
Sbjct: 227 AQILPGNPYLEQDLVRLAKKLAMPQYEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQP 286

Query: 297 LSFPI-IKPDTSTATFAQIGVDG---QQLNLTQLN---------STTAMSRRALRDDMPG 343
           L+ P  I  +  T +    G  G   Q L+L  L+         +  A++  AL++D+P 
Sbjct: 287 LTVPFTISGNWQTVSLPTYGSSGPAPQPLSLMGLDTPLQPATITNIDALAINALKEDLPA 346

Query: 344 IILRTTVRA-----ITRGVAQKQINETNPLAGLAVG--ITSAVLEGADTRTWRTLPDNTQ 396
           +++R   R      +TRGV  +     +   G AV   I + + E AD R+W TLP   Q
Sbjct: 347 LLIRQAARVYAKSELTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLTLPKQAQ 406

Query: 397 VVRLRLKKGEHHVTLPSA 414
           + R  L +G++ VTL +A
Sbjct: 407 IGRRFLPEGDYSVTLGNA 424