Pairwise Alignments

Query, 464 a.a., TPR domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 466 a.a., TPR repeat-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  154 bits (390), Expect = 5e-42
 Identities = 117/449 (26%), Positives = 199/449 (44%), Gaps = 57/449 (12%)

Query: 2   AFRAPALIALSAVTLL--SGC---SAFRNYDSELAQTNQQLASGNVEAALTLLEKNNTGK 56
           +F  P L  L    +L  SGC   S F NY +++A   QQL +    A +  L  N  G 
Sbjct: 8   SFIKPTLSTLMLAAILGSSGCAYNSIFINYPAQIAPIKQQLNTATPMADIDKLASNIQGN 67

Query: 57  DKDLLYYFEKGELLRAKGDLSGSQNAWTSADQVVGKWEDAVKLDTDKYLAQFGSFLVNDK 116
           D  LLY  E G + +  GD + S+  +  A +    ++D  K+      A   S ++ND 
Sbjct: 68  D-GLLYAQEAGRVAQVAGDFASSRKYYQQAVEAYTAFDDKAKISASDIGATATSLVLNDN 126

Query: 117 VRRYEGYDYEKVMLTTQMALNLLAVNDFDGARTAIKKTHEREAVIADLRDKEYLKSEEQA 176
              Y G  YE++ML    ALN L   D+ GA   +++++E +                 +
Sbjct: 127 AIPYRGPGYERIMLHQYQALNYLFSGDYQGALVEVRRSNELQG----------------S 170

Query: 177 EKEGVKTQYKDLQGYPVASLDA------PEVVSLKNSYQSAFSHYLAGFVYEALGEKDLA 230
           E+E  +   K +Q     ++DA          ++ +S+ +A+S+Y  G ++E LGE + A
Sbjct: 171 EQERYQKSQKSVQAMANGTIDAEVNKLGQAAGTVTSSFLNAYSYYTTGLLHEVLGEPNDA 230

Query: 231 APGYRKAVELRPNTPLLEQALVNLDKP------------------AKSDDSDILIVVQSG 272
              YRKA ++ P+   L+Q LV L K                    K+ +  ++++V+ G
Sbjct: 231 FIDYRKAAQITPDNTYLQQDLVRLAKQLGMPQYDEFKRRWGDAKLPKAGEGQVILMVEKG 290

Query: 273 LAPSRDSIRIPLPLPISNNVVITPLSFPIIKPDTSTATFAQIGVDGQQLNLTQLNSTTAM 332
             P + ++ +P  +  +   V    S     P+ S    AQ+   G  L    + +  A+
Sbjct: 291 FVPEKQALTVPFTIHGNWQTV----SLATYGPNNSFVAEAQVQGLGSVLKTEPIANIDAL 346

Query: 333 SRRALRDDMPGIILRTTVRAITRGVAQKQI-------NETNPLAGLAVGITSAVLEGADT 385
           +  AL++D+PG ++R   R   +     Q+       N    +  +A+ I + V E AD 
Sbjct: 347 AINALKEDLPGTLVRQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVVTEQADR 406

Query: 386 RTWRTLPDNTQVVRLRLKKGEHHVTLPSA 414
           R+W TLP   Q+ R  L  G++ + L  A
Sbjct: 407 RSWLTLPKQAQIGRRYLNPGQYTLQLDKA 435