Pairwise Alignments

Query, 398 a.a., Uncharacterized protein ImpI/VasC from Pseudomonas fluorescens FW300-N1B4

Subject, 495 a.a., type VI secretion system-associated FHA domain protein TagH from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 8e-12
 Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 12/186 (6%)

Query: 214 GVDLKGLDHDAREALALNAARLLKQSVG-GLQQSLRTRSELKNELRLAQ-----TTVQGT 267
           G  L+GL  D  +   +N   LL Q +G  LQ  +R   +L  ++  ++       +Q  
Sbjct: 304 GPILEGLGVDLSDENDMNRMHLLSQELGESLQACVRGLLDLHQQVSESRFGTLNRNLQPI 363

Query: 268 HKNPLKFAVDAGEALGILLQGNKPG-QLPAEQAISRAFRDLQAHQVALLTASRAAVRGTL 326
             NPL+  +   E +  L   +K    L A  AI+ + + ++ H  A+  A+  A+   L
Sbjct: 364 EDNPLRLGLSYEETIRTLYDADKSVVHLSAPAAIAESLKTVRDHNEAMQFATSEALSQIL 423

Query: 327 EHFSPQQLTLRF----ERDNKPLLATSGSRWRAYGRYHQALRLDDDWS-ERLLARDFAQA 381
             FSPQ +  RF       +    +T    W  Y  Y+Q L  +     E+L    F QA
Sbjct: 424 NAFSPQVMLRRFHHYKRNSDTTQTSTDAWAWNMYCSYYQELTSNRQRGFEKLFWEIFEQA 483

Query: 382 YEEQIR 387
           Y+ +IR
Sbjct: 484 YDRKIR 489



 Score = 35.0 bits (79), Expect = 5e-06
 Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 17/137 (12%)

Query: 20  QKTFKQAGGVIGRGEDCDWIIPDRKRHLSNHHALISYREGTFFLTDTSSNGIQDSESGAR 79
           Q T+  +GGVIG   +  W + D +  +   H  +   +G + L D S      + +   
Sbjct: 26  QHTWTSSGGVIGSSPNAQWRLVDAQGSVKPMHCEVMMVDGAYCLKD-SCGSTYVNGADMP 84

Query: 80  LRKGEPMRIEHGSVYVLGDFEIRARLVRDPATFDVEVGRPQAAGSIIPDDAFLDL----- 134
           L  G+  R+ H     +G + +R  L  +    + + G   A  +   +D   DL     
Sbjct: 85  LGVGQMARLTHKDEVSVGPYRLRV-LFGNAIEVEEQYGSLDALFASKDEDLLADLTLDIE 143

Query: 135 ----------DPLNALD 141
                     DPL ALD
Sbjct: 144 PEKHELPTNTDPLQALD 160