Pairwise Alignments

Query, 619 a.a., Protein ImpG/VasA from Pseudomonas fluorescens FW300-N1B4

Subject, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (568), Expect = 2e-62
 Identities = 183/633 (28%), Positives = 284/633 (44%), Gaps = 72/633 (11%)

Query: 9   YNQELHHVRESAAEFAQEYPKIASRLTLSGMDCADPYVERLLEGFAYLTARVQLKLDAEY 68
           + +EL  ++E   EF + +P+++    L G    DP VERLLEGFA+LTAR++ K++ E+
Sbjct: 7   FREELAFLKEQGKEFTEIHPQLSR--FLHGRT-TDPDVERLLEGFAFLTARLREKVEDEF 63

Query: 69  PTFTHNLLEIAYPHYLAPTPSMTVVQLQADPDEGSLSSGFPLPRDTVL--RAALGRETQT 126
           P  TH+++ + +P+YL P PSM+VV  + D    S+S    +PR+T L  +   G    T
Sbjct: 64  PELTHSIINMLWPNYLRPIPSMSVVAFEPDK---SVSEKQVIPRNTQLDSKPVFG----T 116

Query: 127 CCEYRTAHAVTLWPLQVSQAEYFGNPSAMLGRLAASEPKAKAGLRLTLRTGAELPFNSLA 186
            C + T   V L+P+Q                  A   +    ++++LR   ++      
Sbjct: 117 ACHFNTCRDVALYPMQCQGVH-------------AEHTREATTIQISLRMLGDMTVGDAK 163

Query: 187 LDNLPLYLNGADEQPFRLYEQLLGNVCAVFARQPGADWVERLPQDALRSQGFDDTDAALP 246
           LD +  YL G       LY  L   +  +     G ++   LP DA  + GF    A LP
Sbjct: 164 LDTVRFYLGGDKYSSQTLYLWLHHYLQKMTIEVQGVEFA--LPADAFSTVGFSSDQALLP 221

Query: 247 VVSRAFQGYRLLQEYFALPHRFLFVDFTQLSRAVKRCDGQELELIVLFDRHDPSLEGSVG 306
                + GYR+LQEY + P  F F D    ++A+ +    +  L + F +  P+ +  V 
Sbjct: 222 YPKNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPA-DTRVR 280

Query: 307 AAQFLPFCTPAINLFPKRLDRIHLSERVNEHHVIADRTRPMDFEIHSLTTLTG-HGTGSE 365
              F  +CTP INLF    D I L+ R +E+ ++     P  +EI S+  + G   T SE
Sbjct: 281 QDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSE 340

Query: 366 -----------QPFLPFYAVRDPSRYGRDQAWYTVRREPRVLSSGQRRNGPRSTYIGSET 414
                        F  F    +  R+ R   +Y  R +  +               G ++
Sbjct: 341 GKRIRGEKRIYSSFESFQHEVERVRH-RQALYYRTRVKESIRGD------------GFDS 387

Query: 415 FVSLVDSQQAPYRHDLRQLGVTALCTNRDLPLFMSVGNSKTDFTLA--DSAPVAAVRCVA 472
           F+S V   +         + +   CTNR LPL + VG    D  +A   S P A  + + 
Sbjct: 388 FISFVRGDETLSMGVDEAVSIKLTCTNRLLPLELGVG----DICVATDSSPPFATFKNIT 443

Query: 473 GPSRPRASHAHDAKAWRLISQLSLNYLSLSEQGQGAAALR--ELLRLYGDSNDAALQLQI 530
            PS+        +  W LIS LSLNYLSL  +   +  LR  +   L     +   ++++
Sbjct: 444 VPSQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRL 503

Query: 531 EGLREVSSK---ACTRRLPMPGPIVFGRGLEITLEFDENAFRGTG-VFLLGAVFERFLAR 586
           +G+ ++ SK      R LP+       RGL+ TL  D+  F   G +FL G V   F A 
Sbjct: 504 DGIVKIESKPVDKILRGLPV-------RGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFAL 556

Query: 587 YVSINSFTETVIRTTERGEIMRWKAKPGRRPTL 619
           Y SINSF E V+      E   W  + G +P +
Sbjct: 557 YASINSFHELVVVNISNQEKYSWGTQSGMQPLI 589