Pairwise Alignments

Query, 367 a.a., DNA recombination and repair protein RecF from Pseudomonas fluorescens FW300-N1B4

Subject, 384 a.a., DNA replication/repair protein RecF from Synechocystis sp000284455 PCC 6803

 Score = 96.7 bits (239), Expect = 9e-25
 Identities = 98/373 (26%), Positives = 160/373 (42%), Gaps = 30/373 (8%)

Query: 1   MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAIHLLGLARSFRSSR---- 56
           M L ++ + A RN        S +  IL G N  GK+++LEA+ LL   +S R+SR    
Sbjct: 1   MYLKKLYLRAFRNYLEEEVEFSAQKTILVGNNAQGKSNLLEAVELLATLKSHRTSRDQEL 60

Query: 57  LLPVIQYEQLACTVFGQVELAEGGHSALGISRDRQGEFQIRIDGQNARSAAQLAEILPLQ 116
           +L      Q+   +  Q  +AE     L I   R G   +RI+    R        L   
Sbjct: 61  VLDGAANGQIKALLERQYSVAE-----LEIDLRRSGRRNLRINQNQCRRQLDFLGCLNAV 115

Query: 117 LINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRH-------- 168
             +     L+ GAP  RRQ+LD  +  +EP +     + Q  ++QRN+ L+         
Sbjct: 116 EFSCLDLDLVRGAPDCRRQWLDTLLTQLEPLYAHLLGQYQHIVKQRNALLKSLRQQWETG 175

Query: 169 ---GTLDAVSQAVWDRELCQASAEIDEYRRAYIKALKPVFEQTLSELVE-LEGLTLSY-- 222
              G     S ++WD++L +    +   R   +  L P+ ++    +    E LT++Y  
Sbjct: 176 LALGEESTASLSLWDQQLVEMGTRVVRRRARGLARLAPLAQEWHGRISGGNETLTVTYQP 235

Query: 223 ---YRGWDKDRELSAVLAGSLQR---DQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQ 276
              + G D +    A L    QR   +  +G T  GP R ++   L    A    S+GQQ
Sbjct: 236 NVTWVGDDPEVVHQAFLEKLAQRRSAELHLGTTVVGPHRDEVGFVLDDTPARTYGSQGQQ 295

Query: 277 KLVVCALRIAQGHLVSQARRGQCIYLVDDLPSELDEHHRRALCRLLEDLRCQVFITCVDH 336
           + +V AL++A+  L+        + L+DD+ +ELD   +  L   +ED R Q  IT    
Sbjct: 296 RTLVLALKLAELSLIETVIGEPPLLLLDDVLAELDLDRQGQLLMAIED-RFQTLITTTHL 354

Query: 337 ELLREGWQTETPV 349
               + W+    +
Sbjct: 355 SRFDDRWRRSAQI 367