Pairwise Alignments

Query, 367 a.a., DNA recombination and repair protein RecF from Pseudomonas fluorescens FW300-N1B4

Subject, 387 a.a., recombination protein F from Synechococcus elongatus PCC 7942

 Score =  100 bits (248), Expect = 9e-26
 Identities = 97/359 (27%), Positives = 158/359 (44%), Gaps = 22/359 (6%)

Query: 1   MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAIHLLGLARSFRSSRLLPV 60
           M L  + +   RN    T        IL G N  GKT++LEA+ L    RS R SR   +
Sbjct: 1   MFLHSLHLQHFRNYRDQTVQFQAPKTILLGENAQGKTNLLEAVELFSTLRSHRVSRDRDL 60

Query: 61  IQYEQLACTVFGQVELAEGGHSALGISRDRQGEFQIRIDGQNARSAAQLAEILPLQLINP 120
           +Q    +  +   VE  + G   L I   +QG  +++ DG+  R    L   L     + 
Sbjct: 61  VQTGAESALLTAVVE-RDSGEQQLQIQLQQQGRRRVQRDGEVLRRQLDLLGSLCSVQFSS 119

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRHG-TLDAVSQAVW 179
               L+ G P+ RR +LD  +  ++P +    Q+  + LRQRN+ LR   +LD    A  
Sbjct: 120 LDLDLVRGGPQQRRDWLDRLLIQLQPIYAHLQQQYGRVLRQRNALLRRAESLDLALLAPL 179

Query: 180 DRELCQASAEIDEYRRAYIKALKPVFEQTLSELV-ELEGLTLSYYRG------------W 226
           + +L Q    I   R   I+ L P+      E+  + E L ++Y               W
Sbjct: 180 NWQLAQLGVHIMRRRSRAIQRLVPLAAHWHREISGQREQLIVAYQPSVLAPDDTDEAIAW 239

Query: 227 DKDRELSAVLAGSLQRDQQMGHTQA--GPQRADLRLRLGAHNAADILSRGQQKLVVCALR 284
            ++R L+ + A   +R  ++G   +  GP R DL L +    A    S+GQQ+ +V +L+
Sbjct: 240 -QERMLAQIEA---RRAAELGQRTSLVGPHRDDLNLSINGTEARLQASQGQQRTLVLSLK 295

Query: 285 IAQGHLVSQARRGQCIYLVDDLPSELDEHHRRALCRLLEDLRCQVFITCVDHELLREGW 343
           +A+  L+        + L+DD+ +ELD   ++ L   + + R Q  IT        + W
Sbjct: 296 LAELELIEAVLGEPPLLLLDDVLAELDLRRQQQLLEAIAN-RFQTLITTTHLSAFDQSW 353