Pairwise Alignments

Query, 367 a.a., DNA recombination and repair protein RecF from Pseudomonas fluorescens FW300-N1B4

Subject, 367 a.a., DNA replication and repair protein RecF from Pedobacter sp. GW460-11-11-14-LB5

 Score =  103 bits (258), Expect = 6e-27
 Identities = 86/369 (23%), Positives = 175/369 (47%), Gaps = 15/369 (4%)

Query: 1   MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAIHLLGLARSFRSSRLLPV 60
           M L  +++   +N        S  +N+  G NGSGKT++L+AIH L L +S+ +      
Sbjct: 1   MWLKNITLLNFKNYTDADLHFSETVNVFTGNNGSGKTNMLDAIHYLCLCKSYFNPIDSQQ 60

Query: 61  IQYEQLACTVFGQVELAEGGHS-ALGISRDRQGEFQIRIDGQNARSAAQLAE---ILPLQ 116
           I+  +    + G  +  E     + G+ R+++ +F+     +N +   +LA+   + P+ 
Sbjct: 61  IKTNEEVFMIQGDFDRNEKNEKISCGVKRNQKKQFK-----RNKKEYEKLADHVGLFPVV 115

Query: 117 LINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMSTWQRLQKALRQRNSWLRHGTL----D 172
           +++P    L+    + RR+F+D  +   +  ++       + L  RN+ L+   +    D
Sbjct: 116 MVSPYDVNLIMEGSEERRKFIDNVISQTDAHYLDQLITYNRILLNRNALLKQIAITRKYD 175

Query: 173 AVSQAVWDRELCQASAEIDEYRRAYIKALKPVFEQTLSELVELEGLTLSYYRGWDKDREL 232
                + D +L  A  +I   R+A++    P+F Q  + L E + +    Y+    +   
Sbjct: 176 PTLLEILDEQLVFAGNKIFAIRKAFMDEFIPLFNQYYTYLTENKEIVELNYQSQLNEATF 235

Query: 233 SAVLAGSLQRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVS 292
             +L  S+++D+ +  T  G  + +L   +         S+GQQK  + AL+IAQ   ++
Sbjct: 236 EELLKKSVEKDRVLERTTTGIHKDELAFVISDMPLKKFGSQGQQKSFLIALKIAQYAYLA 295

Query: 293 QARRGQCIYLVDDLPSELDEHHRRALCRLLEDLRC-QVFITCVDHELLREGWQ-TETPVA 350
           + +  + + L+DD+  +LD++  + L +++      Q+FIT    E ++  ++  E  V 
Sbjct: 296 KNKGFKPLLLLDDIFDKLDDNRVQKLMQMVSHHDFGQIFITDTGRERVKSIFEKIEVDVT 355

Query: 351 LFHVEQGRI 359
           LF V+ G I
Sbjct: 356 LFEVDNGTI 364