Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 371 a.a., DNA-protecting protein DprA from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (532), Expect = 1e-58
 Identities = 144/369 (39%), Positives = 198/369 (53%), Gaps = 22/369 (5%)

Query: 13  ELEARLRLHRLPELGPARFKKLLEAFGSASKAISAPASAWRALGLPLACAEARRSSEIRD 72
           +L A L L   P+LG      LL     A      P   W A GL         +++   
Sbjct: 5   DLAAWLALCFTPKLGSKTISHLLATRLPAQLQSFTPKQ-WLACGLKPEQL-VFLTTQAAK 62

Query: 73  RASHALAWLERPGQHLLMWDQ-PDYPALLAQISDAPPLLFAAGDPGILEKPQLAMVGSRR 131
           +A   L W        ++    P YP LL +I+ +PP+LF  G    +  P +A+VGSR 
Sbjct: 63  QAEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPVLFIEGIWEAVHDPAVAIVGSRN 122

Query: 132 ASRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFYPQ 191
           AS  G   A  F+  LA +G V+TSGLALGID  AH  AL   GQTV VLG+GL   YP+
Sbjct: 123 ASVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVYPK 182

Query: 192 RNRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLITA 251
           +++ LA+ +IA G A++SEF     P   +FPRRNRIISGLSLGV+VVEA+  SGSLITA
Sbjct: 183 QHQGLAERIIAQG-ALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLITA 241

Query: 252 RLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEALRGWQRLPLSTETPT 311
           R AAEQGREV+ +PGSI +  ++G +QLIR GA LV++++ I + L+      LS + P 
Sbjct: 242 RYAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQVPY 301

Query: 312 ET-------------HPLLIL---LHAAPHTSEALAVTSGWALSKVLAALTELEMDGRAV 355
           +               P L+    + A P   + LA  +   +  ++  L ELE+ G  V
Sbjct: 302 QATLFSAVQSDEELPFPELLANVGIEATP--IDILASRTQIPVQDIMMQLLELELLGHVV 359

Query: 356 CESGRWFAR 364
              G +  +
Sbjct: 360 AVPGGYIRK 368