Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 383 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  198 bits (504), Expect = 2e-55
 Identities = 140/373 (37%), Positives = 191/373 (51%), Gaps = 30/373 (8%)

Query: 7   TSISPAELEARLRLHRLPELGPARFKKLLEAFGSASKAISAPASAWRALGLPLACAEARR 66
           T++S  +  A LRL R   +GPA F+ L+  FG+A  A+ A     R  G       A R
Sbjct: 11  TALSERQKIAWLRLIRSDNVGPATFRDLISHFGNAEAALEALPELSRRGG-------ADR 63

Query: 67  SSEIR--DRASHALAWLERPGQHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQL 124
           S  I   D A   L    R G   +   +PDYP  L QI  APPLL   G+     +P L
Sbjct: 64  SFRIATVDEAERELEAAHRFGAVFVGIGEPDYPDALRQIDGAPPLLATKGNLNATARPSL 123

Query: 125 AMVGSRRASRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTG 184
            +VGSR AS  G   AA  +R    AG+VITSGLA GID AAH+A+L  G  T+ VL  G
Sbjct: 124 GIVGSRNASVSGAKFAAMIARDAGAAGYVITSGLARGIDTAAHRASLRTG--TIAVLAGG 181

Query: 185 LENFYPQRNRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVA 244
           L+  YP  N  L   +++     +SE P    P   +FPRRNR+++G+SLGV +VEA+  
Sbjct: 182 LDRPYPPENLGLLQEIVSGEGLAVSEMPFGWEPRARDFPRRNRLVAGISLGVAIVEAANR 241

Query: 245 SGSLITARLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEALRGWQRLP 304
           SGSLITAR AA+ GR V+A+PGS   P   G + L++ GA +  +   ++EAL    R  
Sbjct: 242 SGSLITARYAADFGRLVFAVPGSPLDPRCHGTNDLLKQGATVTTSSADVIEALAPLSRDD 301

Query: 305 L---------STETP---------TETHPLLILLHAAPHTSEALAVTSGWALSKVLAALT 346
           L         S E P         T+   ++  L   P   + L   +G A  ++   L 
Sbjct: 302 LFSRLEANEPSAEEPRPMPQPPDDTDRSRVVEALGPTPVAIDDLIRYTGLAAPQIHMVLV 361

Query: 347 ELEMDGRAVCESG 359
           EL++ G+ +C  G
Sbjct: 362 ELDLAGQ-LCRHG 373