Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 412 a.a., putative protein Smf from Phaeobacter inhibens DSM 17395

 Score =  199 bits (507), Expect = 9e-56
 Identities = 125/282 (44%), Positives = 162/282 (57%), Gaps = 13/282 (4%)

Query: 18  LRLHRLPELGPARFKKLLEAFGSASKAISAPASAWRALGLPLACAEARRSSEI--RDRAS 75
           LRL R   +G   F +LL  +GSA  A+SA     RA G+        +  EI   D A 
Sbjct: 25  LRLLRSRRVGAVTFHRLLAKYGSAQNALSALPEMARAAGI--------KGYEICSADAAL 76

Query: 76  HALAWLERPGQHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQLAMVGSRRASRP 135
             +   E     LL + + DYP+ LA + DAPPLL+A GDP  L +P +A+VG+R AS  
Sbjct: 77  AEIKAAEAANARLLCFGEADYPSHLAVLRDAPPLLWAVGDPAHLNQPTIAIVGARNASSL 136

Query: 136 GMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFYPQRNRR 195
           G+  A A +R L  AG+ I SGLA GID AAH AAL  G  T  V+  G++  YP  N R
Sbjct: 137 GVRMARALARELGEAGYCIISGLARGIDTAAHMAALRTG--TCAVMAGGVDVIYPTENTR 194

Query: 196 LADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLITARLAA 255
           LA   IA    ++SE P+   P   +FP RNRII+G +  V+VVE +  SGSLITAR A 
Sbjct: 195 LA-GDIAEQGVMISEHPMGMSPRARHFPARNRIIAGAAQAVVVVEGAAKSGSLITARDAL 253

Query: 256 EQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEAL 297
           + GR+V A+PG      A GC+ LIRDGA LV   + ++EAL
Sbjct: 254 DLGRDVLAVPGHPFDARAAGCNMLIRDGAQLVRNAQDVIEAL 295