Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 339 a.a., DNA protecting protein DprA (RefSeq) from Shewanella loihica PV-4

 Score =  219 bits (558), Expect = 8e-62
 Identities = 138/311 (44%), Positives = 177/311 (56%), Gaps = 14/311 (4%)

Query: 54  ALGLPLACAEARRSSEIRDRASHALAWLER-PGQHLLMWDQPDYPALLAQISDAPPLLFA 112
           AL LP     A+ S +       ALAW +  P  H+L      YP+LL Q++D PP+LFA
Sbjct: 16  ALPLPERLLTAKLSPDF-SLVEQALAWQDAAPHHHILCPQDTLYPSLLLQLNDPPPILFA 74

Query: 113 AGDPGILEKPQLAMVGSRRASRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALD 172
            GDP  L  P +AMVGSR AS+ G+  +   ++ L  A   + SG+A GID AAHQ  LD
Sbjct: 75  KGDPNALVHPCIAMVGSRAASQSGLAASYQLAQELTAAKIAVISGMAAGIDGAAHQGVLD 134

Query: 173 VGGQTVGVLGTGLENFYPQRNRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGL 232
             G T+ VLGTG+E  YP+R++ + + +   G  VLSEF     P   NFP+RNRIISGL
Sbjct: 135 ADGVTLAVLGTGIEVIYPKRHKPIYEKIQQRG-CVLSEFWPQIKPYAGNFPKRNRIISGL 193

Query: 233 SLGVLVVEASVASGSLITARLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEH 292
           SLGVLVVEA+  SGSLITAR A EQGREV+A+PG+I     +GCH L+RDGA LVE    
Sbjct: 194 SLGVLVVEAARKSGSLITARFALEQGREVFAVPGNILAGDHQGCHDLLRDGAKLVECAAD 253

Query: 293 ILEALRGWQRLPLST--------ETPTETHPLLILLHAAPHTSEALAVT---SGWALSKV 341
           I+E +    +  L          E      P   LL +  + +  L V    SG  +  V
Sbjct: 254 IIEEVAALSKFHLEELHRRHHIGEELASDLPFASLLASVGYEATPLDVVVEHSGKTIELV 313

Query: 342 LAALTELEMDG 352
           L  L ELE+ G
Sbjct: 314 LEQLLELELQG 324