Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 372 a.a., DNA protecting protein DprA from Dechlorosoma suillum PS

 Score =  248 bits (633), Expect = 2e-70
 Identities = 155/369 (42%), Positives = 208/369 (56%), Gaps = 20/369 (5%)

Query: 14  LEARLRLHRLPELGPARFKKLLEAFGSASKAISAPASAWR-ALGLPLACAEARRSSEIRD 72
           L A LRL  +P +GP   + LL AFG   +  SAP SA +  +G     A+    ++ ++
Sbjct: 6   LTAWLRLTLVPGVGPETQRHLLAAFGLPEQVFSAPRSALKQVVGKK---ADLLLDTDNQE 62

Query: 73  RASHALAWLERPGQHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQLAMVGSRRA 132
               AL W  +PG  +L    PDYP LL + +D P LL+  G   +L +P LA+VGSR A
Sbjct: 63  AVDRALDWAGKPGNRILTLADPDYPQLLLESADPPSLLYVKGRVELLNRPALAIVGSRNA 122

Query: 133 SRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFYPQR 192
           +  G+  A A +  LA  G  I SGLALGID AAH+  L   G +V ++GTG +  YP R
Sbjct: 123 TPQGLKDAEALAADLAAQGLTIVSGLALGIDGAAHRGGLKGEGGSVAIIGTGADRIYPSR 182

Query: 193 NRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLITAR 252
           ++ LA   +A+  A++SEFPL       NFPRRNRII+G++ G LVVEA++ SGSLITAR
Sbjct: 183 HKELA-LQLATEGAIVSEFPLGTPAVAHNFPRRNRIIAGMAKGCLVVEAALESGSLITAR 241

Query: 253 LAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEALRGWQ-------RLPL 305
           LAAE GREV+AIPGSIH P AKGCH+LI+ GA LV+    I+E +  +        R PL
Sbjct: 242 LAAELGREVFAIPGSIHSPVAKGCHRLIQQGAKLVQEARDIVEEIGPFDPPGCKPARTPL 301

Query: 306 STETPTETHPLLILLHAA--------PHTSEALAVTSGWALSKVLAALTELEMDGRAVCE 357
           ST     T P+L    AA        P   + L   +G     + A L  LE+  R    
Sbjct: 302 STGNTPTTAPILDPGQAAVLDALGHDPANLDQLLQRTGLTTEALCAILVTLELADRVASL 361

Query: 358 SGRWFARVN 366
            G  + R++
Sbjct: 362 PGGRYQRLS 370