Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 553 a.a., DNA protecting protein DprA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  204 bits (520), Expect = 4e-57
 Identities = 127/288 (44%), Positives = 162/288 (56%), Gaps = 4/288 (1%)

Query: 13  ELEARLRLHRLPELGPARFKKLLEAFGSASKAISAPASA---WRALGLPLACAEARRSSE 69
           EL A L L   P +GP    +LL   GSA  A+ A       W   G+    A       
Sbjct: 21  ELWAALALRHSPGIGPRTVCRLLAGLGSALAAVQAADRGGHDWALAGVRPHMAAPVARGV 80

Query: 70  IRDRASHALAWLERPGQHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQLAMVGS 129
            RD A      +      +L+W  P YPA L ++SDAP +L+  GD  +L    +A+VGS
Sbjct: 81  WRDTARQEWDAVRACRCSILLWTDPRYPARLREVSDAPAVLYCRGDASLLANHAVAVVGS 140

Query: 130 RRASRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFY 189
           R +SR G   AA  + +L+ AG  + SGLA GID  AH AAL+  G T+GVLGTG++  Y
Sbjct: 141 RLSSRAGRGVAADIAYSLSAAGVTVVSGLARGIDREAHVAALEEVGSTIGVLGTGIDVVY 200

Query: 190 PQRNRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLI 249
           P  +  L + M A+G  ++SE+     P P++FP RNRIISG S+GVLVVEA+  SGSLI
Sbjct: 201 PPEHAELFERMEATG-LLVSEYAPGTLPLPAHFPVRNRIISGFSVGVLVVEAAARSGSLI 259

Query: 250 TARLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEAL 297
           TARLA EQGREVYA+PG        GC  LI  GA  V T E +L  L
Sbjct: 260 TARLALEQGREVYAVPGPATAQYTCGCRGLIEQGARPVTTAEDMLADL 307