Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 379 a.a., DNA protecting protein DprA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  207 bits (527), Expect = 4e-58
 Identities = 146/353 (41%), Positives = 185/353 (52%), Gaps = 31/353 (8%)

Query: 18  LRLHRLPELGPARFKKLLEAFGSASKAISAPASAWRALGL----PLACAEARRSSEIRDR 73
           L+L R P +GP  F KLL  +G+A  A+ A      A GL    P+A          RDR
Sbjct: 28  LQLIRSPRVGPVTFHKLLAEYGTARAALDALPEVGSAAGLKDLRPIA----------RDR 77

Query: 74  ASHALAWLERPGQHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQLAMVGSRRAS 133
                    + G  L       Y   L+ I DAPPLL+  GD  +L++  +A+VG+R AS
Sbjct: 78  VEKEYTTGRKMGARLAALGGTLYSDRLSSIDDAPPLLWCLGDVELLKRSAVALVGARNAS 137

Query: 134 RPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFYPQRN 193
             G   A AF++ L     VI SGLA GIDAAAH AA+D G  T+ V+  GL+  YP+ N
Sbjct: 138 AIGQRLARAFAKGLGSEDQVIVSGLARGIDAAAHDAAIDTG--TIAVVAGGLDVIYPKEN 195

Query: 194 RRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLITARL 253
             L    IA    ++SE PL   P   +FPRRNR+ISGL+  V+VVEA+V SGSL+TAR 
Sbjct: 196 TELFKR-IAKQGLIVSEQPLGMQPQARHFPRRNRLISGLARAVVVVEATVKSGSLLTARD 254

Query: 254 AAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEALRGWQRLPLSTETPTET 313
           AA+QGREV A PG      A GC+QL+RDGA LV   E IL AL      P S E     
Sbjct: 255 AADQGREVMAAPGHPFDGRASGCNQLLRDGATLVRNAEDILLALSPEAAAP-SPEPAAAP 313

Query: 314 HP-------------LLILLHAAPHTSEALAVTSGWALSKVLAALTELEMDGR 353
            P             +L  L A P   + +    G   ++V AAL ELEM G+
Sbjct: 314 APELGRPSADELRGRVLATLGATPLPEDQVIRALGLPAAQVNAALVELEMSGQ 366