Pairwise Alignments

Query, 366 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Pseudomonas fluorescens FW300-N1B4

Subject, 338 a.a., DNA protecting protein DprA (RefSeq) from Shewanella sp. ANA-3

 Score =  218 bits (555), Expect = 2e-61
 Identities = 136/300 (45%), Positives = 177/300 (59%), Gaps = 15/300 (5%)

Query: 73  RASHALAWLERPG-QHLLMWDQPDYPALLAQISDAPPLLFAAGDPGILEKPQLAMVGSRR 131
           R   AL W ++    HL+ +  P YP LL Q+ D P +LF  G    L  P LA+VGSR 
Sbjct: 33  RVDAALEWQQQSELHHLVCFTDPFYPPLLKQLPDPPSVLFIKGCVEALLLPSLAIVGSRN 92

Query: 132 ASRPGMDTAAAFSRTLAGAGFVITSGLALGIDAAAHQAALDVGGQTVGVLGTGLENFYPQ 191
           AS  G+  A   +R ++  GF I SG+A+GID AAH+A +D GG+T+ VLGTG++  YP+
Sbjct: 93  ASPGGLQVAYQLAREMSALGFSICSGMAMGIDGAAHKACVDHGGRTLAVLGTGIDIIYPR 152

Query: 192 RNRRLADAMIASGSAVLSEFPLDAGPSPSNFPRRNRIISGLSLGVLVVEASVASGSLITA 251
           R+++L + +   G  ++SEF  D GP   NFP+RNRIISGLSLG LVVEA   SGSLITA
Sbjct: 153 RHKQLYEDIQHQG-CIISEFWPDIGPFAGNFPKRNRIISGLSLGTLVVEACRKSGSLITA 211

Query: 252 RLAAEQGREVYAIPGSIHHPGAKGCHQLIRDGAVLVETIEHILEALRGWQRLPLSTETPT 311
           RLA EQGREV+A+PGSI     +GCH L+RDGA LVE+   I+E L       L  E  T
Sbjct: 212 RLAMEQGREVFAVPGSILGGFHQGCHDLLRDGAKLVESAADIVEELVSLTAFHLE-EVNT 270

Query: 312 ETH---------PLLILLHAAPH---TSEALAVTSGWALSKVLAALTELEMDGRAVCESG 359
             H         P   LL +  +   T +A+   SG  +  VL  + ELE+ G  V   G
Sbjct: 271 RHHIQQGEICDLPFSSLLASVGYETTTIDAVVEHSGKTIDLVLEQMLELELQGWVVAVPG 330