Pairwise Alignments

Query, 273 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Pseudomonas fluorescens FW300-N1B4

Subject, 301 a.a., shikimate 5-dehydrogenase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  113 bits (283), Expect = 4e-30
 Identities = 92/261 (35%), Positives = 123/261 (47%), Gaps = 21/261 (8%)

Query: 4   YVVFGNPIGHSKSPLIHRLFAEQTGQKLDYSTLLAPLDDFSGCAQAFFR-EGRGANVTVP 62
           Y + G+P+GH+ SPL+H            Y     P   F+   +A       GA+VT+P
Sbjct: 37  YGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVTIP 96

Query: 63  FKEDAYRLANSLTKRAQRAGAVNTLSKLADGSLLGDNTDGAGLVRDLTVNAGFSLAGKRI 122
            KE+A RL + +T RA+  GAVNTL  L DG + G+NTD  G +  L         G RI
Sbjct: 97  HKEEALRLCDRVTDRARAVGAVNTLF-LEDGVVCGENTDVTGFLAPLRAR------GVRI 149

Query: 123 ---LLLGAGGAVRGALEPLLAEQPASVIIANRTVEKAELLAELF-ADLGPVSASGFDWLQ 178
              L+LGAGGA R  L  L+      V I+NRT +KA  LA  F AD+ P    G     
Sbjct: 150 DEALVLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGADVVPWDERG----S 205

Query: 179 EPVDLIINATSASLSG---DVPPIASSLIEPGKTVCYDMMYGKDPTSFCRWASEHGAAVA 235
               L++N T   + G      P+       G+ + YD++Y    T F   A   G    
Sbjct: 206 AAAGLVVNTTPCGMQGARMGESPLPEGAFS-GRGMAYDLVYNPLTTRFLADARAAGWE-T 263

Query: 236 MDGLGMLAEQAAEAFYLWRGV 256
            DGLGM  EQ  E F +W G+
Sbjct: 264 QDGLGMFVEQGREQFRIWTGL 284