Pairwise Alignments

Query, 316 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (372), Expect = 2e-40
 Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 6/301 (1%)

Query: 2   YDALGDLSLDLLRAFEAAARQRSFTAAAVELGTTQPAISQQIKRLEEQLATRLFDRIYRG 61
           +  +    L  L  FE AAR  SF+ AA EL  T  AIS +I +LEE++  +LF+R +R 
Sbjct: 11  HSRINSFQLSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRK 70

Query: 62  IELTEAGTILFEQVQLGLQNIEAGLSAISAQQQHEVLQVATDFAFAAYWLMPRLHRFHTA 121
           + LTE G  ++  +Q  L N+   ++ I   +   +L + +  +FA  WL+PR+H F   
Sbjct: 71  VVLTEEGQRIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKEL 130

Query: 122 NPQVDVSLVTSERSHNMLRTDIDVAVLFGDGRFKQGESHWLFSEEVFPVCSPLLLKDRAL 181
            P +D+ L+T   + +   + IDVA+ F D    +     +FSE + PVC+P   +  +L
Sbjct: 131 YPSIDLKLLTGNENISFQGSGIDVAIYFDDHMPDKLSCKEIFSETIIPVCTPEYAQKYSL 190

Query: 182 PLPAQSLLEFPLLH--LRGEHSSNWFDWSGVFRELGITSAPAPGQLRFDNYTLLIQAAIG 239
                +L    LLH      ++S+  +W        + +     ++ FD   L + AAI 
Sbjct: 191 TSSMDNLYNTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAIN 250

Query: 240 GQGVAIGWRHLVDNLLAQGLLCRPIADT-VISRLGYYV-VLPQRKRRRALIQLFVDWLMA 297
             G+A+G   LV + L+ G L  P  +T VI +  YYV  LP +  ++  ++LF+DWL +
Sbjct: 251 NAGIAMGRFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNKHNQK--VKLFIDWLES 308

Query: 298 E 298
           +
Sbjct: 309 Q 309