Pairwise Alignments

Query, 448 a.a., alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas fluorescens FW300-N1B4

Subject, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  319 bits (817), Expect = 1e-91
 Identities = 196/460 (42%), Positives = 269/460 (58%), Gaps = 29/460 (6%)

Query: 11  ILLVDDESAILRTFRYCLEDEGYSVATATSAAQAEALLQRQVFDLCFLDLRLGEDNGLDV 70
           +L+VDD+ A     R  L   GY+   A     A   ++ +  D   +D+R+    G++ 
Sbjct: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEA 65

Query: 71  LAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQL------ 124
           L ++    P + V+I+TA+S+V+TAV+A++ GA DYL KP   D LR    + L      
Sbjct: 66  LRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLV 125

Query: 125 -EVRQLSARLEALEGEVRKPKEGLDSHSPAMKVVLETARQVASTDANILILGESGTGKGE 183
            E R+L +RL+      R P  G+   S  M+ + E    VA ++A +LI GESGTGK  
Sbjct: 126 SENRELKSRLD---DAARAP--GIIGRSAPMRELAELVATVAPSEATVLITGESGTGKEL 180

Query: 184 LSRAIHGWSKRQKKSCVTINCPSLTAELMDSELFGHSRGAFTGASESTLGRVNQADGGTL 243
           ++R++H  S+R  K  VT+NC +L+  L++SELFGH RGAFTGA +   GR  QADGGTL
Sbjct: 181 VARSLHEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTL 240

Query: 244 FLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFRED 303
           FLDEIG+ PL LQ KLLR +Q  E +RVG  V    DVR+LAATN +L + V  GRFRED
Sbjct: 241 FLDEIGELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFRED 300

Query: 304 LLYRLNVITLHLPPLRERREDILNLADRFLARFVKEYSRPARCFSDEAREALLSYRWPGN 363
           L YRLNVI +H+P LRER +DI  LA  FL R+ +   +  + F+ +A + LL + WPGN
Sbjct: 301 LFYRLNVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGN 360

Query: 364 IRELRNVVERASIICPQERVELSHLGM--------------AETPTNHTPRIGAALSLDE 409
           +REL N VERA I+   + V    L M              A  PT   P  G  LSL++
Sbjct: 361 VRELENAVERAVIMATGDWVGERELPMSLRGAGGADPAVADAALPTGQDPYAG--LSLED 418

Query: 410 LEKAHIGAVL-ATADTLDQAAKTLGIDASTLYRKRKQYNL 448
           LE+  I A L  T D   +AA+ LGI  +TL+ K K+Y+L
Sbjct: 419 LERRAIVATLRETGDNKSEAARRLGITRATLHNKLKKYDL 458