Pairwise Alignments

Query, 676 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

Subject, 524 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  163 bits (412), Expect = 2e-44
 Identities = 98/333 (29%), Positives = 187/333 (56%), Gaps = 7/333 (2%)

Query: 344 LLDDLALPERHRPQAEAMRDRLQNGLNWYELLPILDDLATLMLAITDSGQHEFEAYLKQL 403
           L+ +L        Q   +R +L  G+N + LL +  ++  L++  + + +   EA+L+Q+
Sbjct: 193 LITELDFNGESGDQLTDIRTKLLLGVNTHTLLELTLEVLRLVVDGSHAERKAAEAFLEQV 252

Query: 404 NERLESFQSNLQAASEGHADNRSAA---RDMDTQIREQVDGLQSSMQEAADLDDLKHVLE 460
           N    S  +NL++A++    ++S     ++M+ ++   V   Q++++E  +L+ LK  + 
Sbjct: 253 NL---SIGNNLKSATQNLEQSQSYMAHRQEMNGELSSLVARSQTALKEQTELEQLKLKMA 309

Query: 461 NHLEGLLGTMDQHQKQRDEREQEVAARLQSLAERVAHMEQEALGYREHLEEQRQKALIDP 520
             L  +  ++ +     ++REQ +  R++   +++  +   A  YR  LE+Q  +A +DP
Sbjct: 310 PLLREM-SSLSERLLLAEQREQALLERMRYSKDQMEALSDLAQDYRRRLEDQALRAQLDP 368

Query: 521 LTGLPNRAAWSERLEHEIGQWQQHGTTLLLAMLDLDHFKRINDNYGHLAGDKVLKIIANV 580
           LT + NR++++ERLEHE  +W +    L + + D+D FK IND++G+ AGDK L IIA  
Sbjct: 369 LTKVYNRSSFTERLEHEYRRWIRTQHNLRVVLFDIDKFKSINDSFGYTAGDKALSIIART 428

Query: 581 LRKRLRGTDFIARFGGEEFVLLMPATLPMVGAKLLETLRASIEACPFHFKGERVTITISM 640
           ++K LR +D +ARF GEEF+LL+P        +++  ++ ++   PF F+ + +TIT+S 
Sbjct: 429 IKKELRDSDTVARFSGEEFILLLPERSDNESYQIIHQIQLNVSKLPFKFRDKSLTITLSA 488

Query: 641 GLTAFRPGEHSDLVLKRADQALYRAKNNGRNRV 673
               F   +  + VL R +  L  AK+ G +++
Sbjct: 489 ASIRFMDSDTPETVLDRLNLTLSEAKHIGPSQL 521