Pairwise Alignments

Query, 265 a.a., Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase from Pseudomonas fluorescens FW300-N1B4

Subject, 432 a.a., Protein of unknown function DUF610, YibQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  127 bits (320), Expect = 3e-34
 Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 18/251 (7%)

Query: 21  PATTAATPAKAY-----------LSLIIDDLGQNLLQDRRVLALPGPVTAAIMPDPPHAT 69
           PA ++  P K Y           ++L+IDD+G + ++  +V  L GP+T A +       
Sbjct: 171 PAESSGLPWKTYGVAAGKWSKPAIALVIDDMGLDRVRTEKVRKLAGPLTLAYLAYADGLA 230

Query: 70  EFAREAHRAGKIVILHMPMAPAT-----GPFAWHPELPIEELEKRLNAAFKAVPYTAGIN 124
              R   +AG  +++HMPM P       GP A    L  +E+  RL           GIN
Sbjct: 231 GQMRGGRKAGHEILMHMPMEPLDAKVNPGPGALKVGLSDDEILTRLRRNLDGGAEFVGIN 290

Query: 125 NHMGSRMTAQQPAMAWLMADLQRRHKFFVDSRTSAQTVAAAEAQKIGLASVSRDVFLDDE 184
           NHMGSR TA    M  +M +L++R   ++DS TSA +V    A+  G+  + R VFLD+ 
Sbjct: 291 NHMGSRFTADSRGMTLVMGELKKRGLLWLDSMTSANSVGLTLAEMAGVPHIGRTVFLDNL 350

Query: 185 PTEAAIFTQLQTAISLARKQGSAVMIGHPYPQTLAVLERELPKLKAQGIDWIDIQQMISV 244
             +AA+  QL    + AR+ G AV IGHP   T+  L   LP L A+GI  + I  +++ 
Sbjct: 351 NDQAAVARQLAKLEAAARQHGVAVGIGHPRDGTIGALSVWLPALAAKGITLVPISALVTT 410

Query: 245 RGNRATAAHGK 255
           +   A  AH +
Sbjct: 411 KD--AELAHAR 419