Pairwise Alignments
Query, 1140 a.a., Pyoverdine sidechain non-ribosomal peptide synthetase PvdD from Pseudomonas fluorescens FW300-N1B4
Subject, 2166 a.a., Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules from Pseudomonas fluorescens FW300-N2E2
Score = 939 bits (2426), Expect = 0.0
Identities = 548/1129 (48%), Positives = 723/1129 (64%), Gaps = 41/1129 (3%)
Query: 1 MNAADAQKLARRFIELPQDKRRLFLVGMAREGIDFAQLPMTSCVGVDERDGLSYAQQRMW 60
M+ + A ++A+RFI LP DKRRL+L M EG+ A LP+ E LSYAQ+R W
Sbjct: 1 MDKSVALRIAKRFITLPLDKRRLYLEKMLEEGVSPANLPIPEVRSGFEHIALSYAQERQW 60
Query: 61 FLWQLDPQSAAYNLPMAVRLSGALQTEALERAFSLLVERHECLRTTFGQEGERAFQRVAE 120
FLWQ+DP S+AY++P A+RL G L ALER+F+ LVERHE LRTTF + GE+A Q +
Sbjct: 61 FLWQMDPHSSAYHIPSALRLKGPLDVAALERSFNALVERHESLRTTFIEHGEQAVQVIHP 120
Query: 121 PRDLTLAINDLSALPEERRWPQAQQHMMAEATQAFDLQQGPLLSLRLLRLAEQEHVLLLT 180
L +A++ L A + + + A++ + FDL+QGPLL + LL++AE +HVL L
Sbjct: 121 HMPLRIAVHALPAGSPASQDDSIKAFVEAQSARPFDLRQGPLLRVSLLQIAEDDHVLALI 180
Query: 181 LHHIIADGWSMNILIDEFMRTYDGLVAGRQPTLPALTVHYRDYALWQRSWLEAGERERQL 240
HHII+DGWSM +L+DE +R Y AG+ LP LTV Y DYA+WQR WLEAGERERQL
Sbjct: 181 QHHIISDGWSMQVLVDELVRYYAADTAGQPLELPELTVQYADYAIWQRHWLEAGERERQL 240
Query: 241 DYWRTQLGDTQLGEEPPILELPTDRAYPAQSSHQGARLEKVIDGALRQDLKTLAQRQGVT 300
YW LG E P+LELP D P S +GARL+ + L LK LAQR+G +
Sbjct: 241 AYWLQTLGG-----EQPVLELPLDHPRPPVRSFRGARLDLNLSPELGAALKQLAQREGAS 295
Query: 301 LFVVLLAAFKTLLHRYSGQTDIRVGGLIANRTRSETEGLIGFFVNTQILRSEVTPQTRFS 360
LF+VLLA+F+ LLHRYSGQ IRVG +ANR R ETEGLIGFFVNTQ+L ++V Q F
Sbjct: 296 LFMVLLASFQALLHRYSGQPQIRVGVPVANRNRVETEGLIGFFVNTQVLSADVDGQLPFD 355
Query: 361 DLLQSLRQAALGAQAHQELPFDALIEALQPARSQSHNPLFQVMFNHQPLVTDLQDVRLDC 420
LL ++Q+A+ AQAHQ+LPF+ LIEALQP RS SH+P+FQVMFNHQ +D QD +
Sbjct: 356 RLLAQVKQSAMAAQAHQDLPFEQLIEALQPERSLSHSPIFQVMFNHQ-TASDTQDRQ--- 411
Query: 421 GLQVGYLSEQQLAGSGRQHAATSDLMLDTREEGEQLFAAFTYATDLFDEQTIAALAEHWH 480
LQ+ LS + L GR A DL L T E + + A TYATDLF+ QTI LA HW
Sbjct: 412 -LQLPRLSIEDLVWEGR--TAQFDLTLGTYETEQGVAAELTYATDLFEAQTIERLAHHWQ 468
Query: 481 NVLVSVCRDPQQPLGEVSMLGTDERERLIQP----VANPALRPGMPQLFEAQAAR-TPDT 535
N+L + PQQ +GE+ +L ++RL Q VA+ G A+ AR TPD
Sbjct: 469 NLLQGIVETPQQRIGELPLLDA-AQQRLTQQDWYRVADHGAGTGCVHWRIAEQARQTPDA 527
Query: 536 TAVILAGDQSPSLSYAELNARSNRLAHQLRAKGVGPDVLVGVALGRSLELAVALLAVLKA 595
A+ + G +L++ +L+AR+N+LAH+L A GV PD VG+A+ RS+E+ V LLA+LKA
Sbjct: 528 LALTIDGQ---TLTHGQLDARANQLAHRLMALGVTPDQPVGIAVERSVEMIVGLLAILKA 584
Query: 596 GGAYVPLDPHTPAERLRHVLDDSGLKLVLTESPLLSSLPALDGIDCLCLDQLPDS--DAA 653
GGAYVPLDP P +RL ++++DSG++L+LT++ L + LP + L LDQ PD+ AA
Sbjct: 585 GGAYVPLDPAYPEDRLAYMIEDSGIELLLTQARLQALLPIPATLQTLLLDQ-PDAALQAA 643
Query: 654 NQDNLQVTVDPQNLAYVIYTSGSTGRPKGVAVSHGALSEFIARAIDYSDLREGDRVLQFA 713
+ V + ++LAYVIYTSGSTG+PKGV V HGALS F+ I L DR+L
Sbjct: 644 PRSCPVVPLTAEHLAYVIYTSGSTGKPKGVMVRHGALSNFVVSMIAQPGLVASDRMLSLT 703
Query: 714 TSSFDGFVEQFFPPLCQGAAVVLRDARL-WDSATLHQVVVEQGITLADLPAAYWYSVVQD 772
T SFD F + + PL GA++VL + D + ++ +T+ + W ++ D
Sbjct: 704 TFSFDIFGLEIYGPLSAGASIVLTGQNVHQDPQAVLALIERHDVTVLQATPSSW-RMLLD 762
Query: 773 YAANPPVHFGALRQIHVGGEAMAVDGLRLWQRAGLGHVRLLNTYGPTEATVVSTIHDCST 832
+ + + A R GGEA+ L L QR ++ N YGPTE T+ S +H S
Sbjct: 763 HEQSALL---AGRTFLCGGEALP---LELAQRLLALSPKVWNLYGPTETTIWSAVHPLSP 816
Query: 833 LTAEAVSWRGIPIGHGLEQRRLYVLDDDLNLLPQGAVGELYIGGPGLARGYHRQPTLSAQ 892
++ +G L+ LY++ DL L P GA GEL IGG GLARGY ++P L+A+
Sbjct: 817 ESSRPF------LGKPLDNTALYIVGSDLTLNPPGAPGELLIGGEGLARGYFQRPALTAE 870
Query: 893 RFIADPFA-VGERLYRTGDRARLRDDGAVEYIGRVDHQVKIRGFRIELGEIESRLQQCPG 951
RF+ DPF+ GERLYRTGD R R +G VEYIGR+DHQVKIRG RIELGEIE+ L
Sbjct: 871 RFVPDPFSRTGERLYRTGDLTRYRAEGVVEYIGRIDHQVKIRGLRIELGEIEAALLAQTS 930
Query: 952 IREAVVLALPLIGGTQLVAYLV-VDQSVLGSAAE-QVILRQQIRASLQKNLPDYMVPGHL 1009
+RE VV+A G QLV Y+V VLG+ AE + LR ++ +L+ LP+YMVP HL
Sbjct: 931 VRETVVVAHEGPTGAQLVGYVVPATAEVLGAEAEAEAALRASLKTALKAQLPEYMVPAHL 990
Query: 1010 LLLPRLPLTPSGKLDRKALPIPDPSQLQSAYRAPQTDTEQALAQIWIEVLQVPRVGVDDH 1069
L L +LPLTP+GK+DRKALP PD S+LQ AY AP++ EQ +AQIW EVL++ RVG+ D+
Sbjct: 991 LFLAQLPLTPNGKVDRKALPAPDASELQRAYVAPRSQREQQVAQIWQEVLKLERVGLHDN 1050
Query: 1070 FFELGGHSLLAAQVIARIKSQLGVVLPLRSLFETPLLGDLALELAALAG 1118
FFELGGHSLL QV++R++ L + +PLRSLFE L D L A +G
Sbjct: 1051 FFELGGHSLLVTQVVSRVRRLLDIEVPLRSLFEYSTLQDFVAALDAGSG 1099
Score = 803 bits (2074), Expect = 0.0
Identities = 491/1055 (46%), Positives = 637/1055 (60%), Gaps = 61/1055 (5%)
Query: 11 RRFIELPQDKRRLFLVGMARE---GIDFAQLPMTSCVGVDERD---GLSYAQQRMWFLWQ 64
RR +++ R LF ++ +D P + RD LS+AQ+R WFLW+
Sbjct: 1069 RRLLDIEVPLRSLFEYSTLQDFVAALDAGSGPQPQAMVAVARDQPLALSFAQERQWFLWK 1128
Query: 65 LDPQSAAYNLPMAVRLSGALQTEALERAFSLLVERHECLRTTFGQEGERAFQRVAEPRDL 124
+DP SAAYN+P A+RL G L AL R+F LV+RHE LRT F ++ R Q + +
Sbjct: 1129 MDPDSAAYNIPTALRLRGTLDKIALRRSFEALVQRHESLRTVFVEDDGRTCQVIRPQGHV 1188
Query: 125 TLAINDLSALPEERRWPQAQQHMMAEATQA-FDLQQGPLLSLRLLRLAEQEHVLLLTLHH 183
+ LSA E + Q + E TQ FDL LL + LL L EQ+HVL LTLHH
Sbjct: 1189 SFVEQRLSAADEA-----SIQAFLEEQTQRPFDLLNDALLRVALLELGEQDHVLALTLHH 1243
Query: 184 IIADGWSMNILIDEFMRTYDGLVAGRQPTLPALTVHYRDYALWQRSWLEAGERERQLDYW 243
I +D WS+ +++D+ M Y G LP L V Y DYA+WQR W+ AGE++RQL YW
Sbjct: 1244 IASDAWSLQVMVDDLMSLYSAFTQGLPAQLPVLEVQYADYAVWQRQWMAAGEQDRQLAYW 1303
Query: 244 RTQLGDTQLGEEPPILELPTDRAYPAQSSHQGARLEKVIDGALRQDLKTLAQRQGVTLFV 303
QLG Q P+LELPTD PAQ S +GARL V+D AL LK LA+R+ VTLFV
Sbjct: 1304 TAQLGSEQ-----PLLELPTDHPRPAQQSLRGARLPIVLDPALSDALKALARRENVTLFV 1358
Query: 304 VLLAAFKTLLHRYSGQTDIRVGGLIANRTRSETEGLIGFFVNTQILRSEVTPQTRFSDLL 363
+LL +F+ LLHRYSGQ DIRVG IANR R ETE LIGFFVNTQ+LR+E +DLL
Sbjct: 1359 LLLGSFQALLHRYSGQADIRVGVPIANRQRLETERLIGFFVNTQVLRAEFHSDLTGADLL 1418
Query: 364 QSLRQAALGAQAHQELPFDALIEALQPARSQSHNPLFQVMFNHQPLVTDLQDVRLDCGLQ 423
Q L+Q A+ AQ HQ+LPF+ L++ALQP R+ SH+PLFQ MFNH+ + + L GL
Sbjct: 1419 QQLKQTAMAAQMHQDLPFEQLVDALQPQRNLSHSPLFQAMFNHRNETASVFEDALP-GLA 1477
Query: 424 VGYLSEQQLAGSGRQHAATSDLMLDTREEGEQLFAAFTYATDLFDEQTIAALAEHWHNVL 483
V L Q A DL L+T + + L AA YATDLF+ T+ + +HW N+L
Sbjct: 1478 VEPL-------GWAQRTAQFDLSLETTDSPQGLHAALIYATDLFEPATLERMGQHWLNLL 1530
Query: 484 VSVCRDPQQPLGEVSMLGTDERERLI-----QPVANPALRPGMPQLFEAQAARTPDTTAV 538
+ +D +P+ + ++L ER RL+ VA P L + L E Q RTPD A+
Sbjct: 1531 HGLVQDLHRPVAQWTLLDAVERRRLLVDWNATAVAYP-LDRSVQGLIEEQVRRTPDAPAL 1589
Query: 539 ILAGDQSPSLSYAELNARSNRLAHQLRAKGVGPDVLVGVALGRSLELAVALLAVLKAGGA 598
+ G+Q LSY ELNAR+NRLAH L GVGPDVLVG+A+ RS+E+ + LLA+LKAGGA
Sbjct: 1590 VF-GEQ--RLSYGELNARANRLAHTLIEHGVGPDVLVGIAVERSVEMVLGLLAILKAGGA 1646
Query: 599 YVPLDPHTPAERLRHVLDDSGLKLVLTESPLLSSLPALDGIDCLCLDQLPDSD--AANQD 656
YVPLDP P +RL ++ +DSG+ L+LT+ LL LP GID L LD LPD A
Sbjct: 1647 YVPLDPEYPRDRLAYMFEDSGIGLLLTQQHLLDQLPIPQGIDSLVLD-LPDDGVYAGRDT 1705
Query: 657 NLQVTVDPQNLAYVIYTSGSTGRPKGVAVSHGALSEFIARAIDYSDLREGDRVLQFATSS 716
N V VD +NLAYVIYTSGSTG+PKG H AL + L D VLQ S
Sbjct: 1706 NPDVVVDGENLAYVIYTSGSTGKPKGAGNRHSALVNRLCWMQQAYGLDATDSVLQKTPFS 1765
Query: 717 FDGFVEQFFPPLCQGAAVVL-RDARLWDSATLHQVVVEQGITLADLPAAYWYSVVQDYAA 775
FD V +FF PL GA +V+ D A L +++ Q IT + S++Q +
Sbjct: 1766 FDVSVWEFFWPLLTGATLVMAAPGAHRDPAQLIELITAQRITTLH----FVPSMLQAFVQ 1821
Query: 776 NPPV-HFGALRQIHVGGEAMAVDGLRLWQRAGLGHVRLLNTYGPTEATVVSTIHDCSTLT 834
+P V +L++I GEA+ VD + A L + L N YGPTEA + T C
Sbjct: 1822 DPHVAECTSLKRIVCSGEALPVDA-QQQVFAKLPNAGLYNLYGPTEAAIDVTHWTCVEEG 1880
Query: 835 AEAVSWRGIPIGHGLEQRRLYVLDDDLNLLPQGAVGELYIGGPGLARGYHRQPTLSAQRF 894
++V PIG + Y+LDD+L+ +P G +GELY+ G GLARGYHR+ L+A+RF
Sbjct: 1881 RDSV-----PIGQPIANLGTYILDDELSPVPVGVIGELYLAGEGLARGYHRRAALTAERF 1935
Query: 895 IADPFAVGERLYRTGDRARLRDDGAVEYIGRVDHQVKIRGFRIELGEIESRLQQCPGIRE 954
+ PF G+RLYRTGD AR R DG +EY GR+DHQVKIRG RIELGEIE+RL + +RE
Sbjct: 1936 VTGPFGHGQRLYRTGDLARYRTDGVIEYAGRMDHQVKIRGLRIELGEIEARLAEHDDVRE 1995
Query: 955 AVVLALPLIGGTQLVAYLVVDQSVLGSAAEQV--ILRQQIRASLQKNLPDYMVPGHLLLL 1012
VV+A GG+ LVAY+V + L SA E V L+ +++A L ++LPDYMVP H L L
Sbjct: 1996 TVVIAQ---GGSLLVAYVVPTHAELLSAEEAVRQALQGRLKAHLSQSLPDYMVPQHWLWL 2052
Query: 1013 PRLPLTPSGKLDRKALPIPDPSQLQ------SAYR 1041
++P++P+GKL+RKALP P SQ Q SAYR
Sbjct: 2053 EKMPVSPNGKLERKALP-PSRSQRQPQGLRRSAYR 2086