Pairwise Alignments

Query, 263 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 274 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  138 bits (348), Expect = 1e-37
 Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 2/223 (0%)

Query: 39  HRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGIWIPADLEHQVVTSMRAEMRSLYVRRED 98
           H H   Q   A+ G +        +  PP   +WIP  + H    +  A +  L+V    
Sbjct: 37  HEHRKGQLILALHGAVTCTADNEIWIVPPNCAVWIPGGVPHSARATANARLTYLFVEPGA 96

Query: 99  CQWAEGRCRVLEVTPLARELIKRFCLLPVEYPQGDSQEARLVGVLLDQLASLPEVGFSLP 158
            +  E  C  L ++P+ RE++ R    P +YP      ARL  V LD+L  +P   F+LP
Sbjct: 97  AKLPE-ECCTLSISPMIREMVDRLAREPADYPS-HGHAARLARVALDELVDMPRERFNLP 154

Query: 159 LPRHERLLGLCNELIDSPERNATLQEWAERLGTSEKTLMRLFQRETGLSFRGWRQRIRLL 218
           +  + ++  + + L   P   +TL EWA+R+  SE++L RL  RETGL+F  WRQ++ L+
Sbjct: 155 ISGNAKIRAIADALTVDPSDRSTLAEWAKRVAMSERSLARLMIRETGLTFGRWRQQLHLV 214

Query: 219 SSLSLLEEGNSVTNAALSCGYDSTSAFIAAFKGLFGFTPGELF 261
            +L  L  G SV   A   GY+S +AFI  FK   G TP + F
Sbjct: 215 VALRQLAGGASVHTVAAELGYESVNAFITMFKKALGSTPAQYF 257