Pairwise Alignments

Query, 263 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  148 bits (374), Expect = 9e-41
 Identities = 80/223 (35%), Positives = 119/223 (53%), Gaps = 1/223 (0%)

Query: 39  HRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGIWIPADLEHQVVTSMRAEMRSLYVRRED 98
           H H+  Q  YA+SGV+ + T +G++  PP   +W+P  LEH+  +    + RSL +    
Sbjct: 26  HSHEEAQLLYAVSGVVSIKTDKGTWVVPPSRAVWLPPKLEHETTSRAGVQFRSLLIDPNG 85

Query: 99  CQWAEGRCRVLEVTPLARELIKRFCLLPVEYPQGDSQEARLVGVLLDQLASLPEVGFSLP 158
            Q     C V+E+T L RELI +   L  + P    +   +V + L +L+  P    +LP
Sbjct: 86  IQGLPDACMVVEITSLLRELILKLAEL-AKTPGSRERTDAVVRLFLMELSFQPAQPLNLP 144

Query: 159 LPRHERLLGLCNELIDSPERNATLQEWAERLGTSEKTLMRLFQRETGLSFRGWRQRIRLL 218
            P H  L  LC ++ +      ++++ A  L  S  T MR F+RETG+SF  WRQ+ R+L
Sbjct: 145 TPTHPDLARLCAKMREDLAEGVSVEDAAAMLYMSRATFMRFFKRETGMSFGHWRQQARML 204

Query: 219 SSLSLLEEGNSVTNAALSCGYDSTSAFIAAFKGLFGFTPGELF 261
            +L LL +G S+ + AL CGY S SAF A F+   G  P   F
Sbjct: 205 DALVLLADGRSILDVALECGYSSPSAFSAIFRRSLGRPPSAYF 247