Pairwise Alignments

Query, 263 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 262 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  145 bits (366), Expect = 8e-40
 Identities = 82/239 (34%), Positives = 128/239 (53%), Gaps = 4/239 (1%)

Query: 27  AESLNAGSWTSPHRHDWVQFSYAISGVLGVHTAEGSFFAPPQWGIWIPADLEHQVVTSMR 86
           A   + G   +PH H   Q  YA SGV+ +   E  +   PQ  +W+PA+L H++    +
Sbjct: 24  AREYSDGQLLAPHWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQ 83

Query: 87  AEMRSLYVRREDC-QWAEGRCRVLEVTPLARELIKRFCLLPV-EYPQGDSQEARLVGVLL 144
             +RS+Y + +   +    + + L V+PL REL+K    +PV    Q  S+E  L+ +L+
Sbjct: 84  VSLRSVYFQPDALPERFSKQPQSLVVSPLLRELMKS--AMPVTSSSQPSSREVHLMQLLM 141

Query: 145 DQLASLPEVGFSLPLPRHERLLGLCNELIDSPERNATLQEWAERLGTSEKTLMRLFQRET 204
            ++    E+   LP+P+  RL  +C  L+  P  + TL +W E +G S +TL RLFQ + 
Sbjct: 142 SEIGWAQEIPLKLPMPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQL 201

Query: 205 GLSFRGWRQRIRLLSSLSLLEEGNSVTNAALSCGYDSTSAFIAAFKGLFGFTPGELFRQ 263
           G SF  WRQ+ R+ +++  L  G  +   A+  GYDS  AF +AFK + G TP E   Q
Sbjct: 202 GTSFAIWRQQARIFAAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEFRTQ 260