Pairwise Alignments

Query, 404 a.a., Integral membrane efflux protein from Pseudomonas fluorescens FW300-N1B4

Subject, 415 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 23/228 (10%)

Query: 13  ARLISDFGAFLNMVALATYVYLLSNSAMSVGI-----FLASRVAGGIFASLIGTRFYRRW 67
           +RL++ F   +  VA+   +Y L+    S+G+     FL S V   +  S +  R+ RR 
Sbjct: 24  SRLLAYFAVQIMSVAVGWQIYDLTRDPFSLGLIGLFQFLPSLVLILVTGS-VADRYNRR- 81

Query: 68  AGRLPLIAFDLLRAGLLG-LLLVLPVTQQALLLPLIAFGLGFGNSMFAIGLNSQ--LPHM 124
                ++   +L + L G  LL+L VT      P+ A  + FG     +G  SQ   P++
Sbjct: 82  ----AIMGICMLVSTLCGAALLLLTVTGLFSPWPVYAILVVFGIERAFLGPASQSLAPNL 137

Query: 125 IDKAQLLKTNAWMTSASSAAMVGGSLVAGLLVAGFGFETVFALNVATYLLAALLIVPLRF 184
           +    L    AW +++   AM+ G +  GLL  GFG    +A+++  +   AL++  +  
Sbjct: 138 VPAEDLPNAIAWNSTSWQTAMIVGPVAGGLLY-GFGPTVPYAVSLGFFAAGALMVFAV-- 194

Query: 185 PRPAPSDEPHHQQGEWSALRQGLRTAP----VLAAMLAVAMADTLGSA 228
           P+PA    P      W  +  G R       VL A+     A  LG A
Sbjct: 195 PKPARRSPP--SAANWQTITAGFRYIKAEKIVLGAISLDLFAVLLGGA 240