Pairwise Alignments

Query, 404 a.a., Integral membrane efflux protein from Pseudomonas fluorescens FW300-N1B4

Subject, 424 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 15/271 (5%)

Query: 3   STRNAQLIIAARLISDFGAFLNMVALATYVYLLSNSAMSVG-IFLASRVAGGIFASLIGT 61
           ++RN +L    +LIS  G ++  +A+A   Y LSNSA  +G +  AS++    F++  G 
Sbjct: 9   NSRNYRLYFVGQLISLAGTWMQQIAMAWLAYRLSNSAFVLGSVGFASQIPILFFSAFAGV 68

Query: 62  RFYRRWAGRLPLIA--FDLLRAGLLGLLLVLPVTQQALLLPLIAFGLGFGNSMFAIGLNS 119
              R    RL L++    +++A +L +L  L      LL+  +A  LG  N++      +
Sbjct: 69  WSDRVDRRRLLLLSQSLSMVQALVLAVLAWLEWITPGLLI-FMALCLGCINALDVPARQA 127

Query: 120 QLPHMID-KAQLLKTNAWMTSASSAAMVGGSLVAGLLVAGFGFETVFALNVATYLLAALL 178
               ++D K  L    A  +   +AA   G  +AG LV   G    F LN  +YL   L 
Sbjct: 128 IAVQLVDDKEDLPNAIALNSFLMNAARFVGPALAGYLVVLMGEAVCFLLNALSYLAVLLA 187

Query: 179 IVPLRFPRPAPSDEPHHQQGEWSALRQGLR----TAPVLAAMLAVAMADTLGSAAHNVGF 234
           +  +R P   PS           AL++G+R      P+  ++L V+    L +  + V  
Sbjct: 188 LSAIRLPAQGPS----RPAPALDALKEGIRYVRGHGPIRRSLLLVSCISFL-ATPYAVMM 242

Query: 235 PIISKLLTPESASTTLGMMLAVWASGKFIGA 265
           P+ ++ +    A  T G+++    +G  + +
Sbjct: 243 PLFAREIFGGDAG-TFGLLMGCAGAGSLVAS 272