Pairwise Alignments

Query, 481 a.a., Mechanosensitive ion channel from Pseudomonas fluorescens FW300-N1B4

Subject, 297 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 47/220 (21%), Positives = 106/220 (48%), Gaps = 1/220 (0%)

Query: 81  WLFAARTLTVLIGAVMMQRVGHTGRLLQDLLGAVIFLIAVIAALAYVLELPVKGVLATSG 140
           W    R   ++  A++ ++V      L   +  ++ +  ++     +L +P+K     SG
Sbjct: 38  WFIVTRIGKLIRRALLARKVAPDAVHLFSRIYLILAIAIILVTSLEILNIPIKAFAFVSG 97

Query: 141 ALAIIVGLALQSTLSDVFSGIVLNTTKPYQLDDWISIDGTEGRVTDIDWRATRLQTAQGS 200
           A+AI VG   Q+ +++  SG +L   +P ++ D++ I  T+G V  I+ R+T ++   G 
Sbjct: 98  AVAIGVGFGAQNIINNFISGWILMWERPIRIGDFLEIGETKGVVESINTRSTLIRRNDGV 157

Query: 201 MAVIPNSLAAKAKIVNFSRPSDIFGVSISLQVSPHARPQTVIDALERAMQGCRFLLAKPA 260
             ++PNS   +  + N++   +I   ++ + V+  +  + V D +++ +     +L  P+
Sbjct: 158 HMLVPNSQLLENTVTNWTLIDNIARSTVRVGVAYGSDVERVADIIKQTLDEHEEILTTPS 217

Query: 261 PSVSLKSSGSTGVEYEISGFVVSMDQKRMVRNLLFDLAFR 300
           P    +  G   + ++   F V  + +  +R +  D+ FR
Sbjct: 218 PVAIFEDFGDNALIFD-GIFWVCANTEADIRRIRSDIRFR 256