Pairwise Alignments

Query, 481 a.a., Mechanosensitive ion channel from Pseudomonas fluorescens FW300-N1B4

Subject, 1060 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 4/235 (1%)

Query: 78   IGWWLFAARTLTVLIGAVMMQRVG---HTGRLLQDLLGAVIFLIAVIAALAYVLELPVKG 134
            +G+ L  A  L  L+  +++QR+     TG  +  +   ++    +++  +  L +    
Sbjct: 805  VGFSLMIATNLPGLLELMILQRLDLTQGTGFAITTVSRYLVVFFGMLSGFS-TLGMEWSK 863

Query: 135  VLATSGALAIIVGLALQSTLSDVFSGIVLNTTKPYQLDDWISIDGTEGRVTDIDWRATRL 194
            +     AL++ +G  LQ   ++  SG+++   KP ++ D ++I    G V+ I  RAT +
Sbjct: 864  LQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVRIGDTVTIRELTGTVSKIQIRATTI 923

Query: 195  QTAQGSMAVIPNSLAAKAKIVNFSRPSDIFGVSISLQVSPHARPQTVIDALERAMQGCRF 254
                    ++PN      +++N+S    I  V + + V+  + P  V  AL +A++ C  
Sbjct: 924  VDWDRKEIIVPNKAFITEQLINWSLSDPITRVIVYVSVARDSDPARVEAALYQAVKECDD 983

Query: 255  LLAKPAPSVSLKSSGSTGVEYEISGFVVSMDQKRMVRNLLFDLAFRHLQASGVSL 309
             L  P P V     G    +YEI  +   M+ +  +R+ L     + L+ + + L
Sbjct: 984  ALTTPEPEVWFAGFGQHTQDYEIRAYAKDMNTRWPLRHKLHKQVSKKLRENHLEL 1038