Pairwise Alignments

Query, 420 a.a., Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 415 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  158 bits (399), Expect = 3e-43
 Identities = 107/341 (31%), Positives = 178/341 (52%), Gaps = 15/341 (4%)

Query: 80  VQLACDLFIHSALLYFSGGSTNPFVSYYLVPLTIAAVTLPWRYSVILSGIALALYTLLLA 139
           + L  D  +  + LYFSGG+TN F+S  L+P+ IAAV LP+     L+ ++   Y+L+L 
Sbjct: 76  IALVLDTLLWISWLYFSGGATNAFISLLLLPIAIAAVLLPFWAPWSLALLSNLAYSLMLF 135

Query: 140 QFYPLETFPIARENLQIY--GMWLSFALAAAVITFFAARMAEELRRQEELRAIRREEGLR 197
              P         ++Q +  GMW++F +++ V+T   A +A+ +RRQ+   A  RE  LR
Sbjct: 136 TM-PESAMSHHGMDMQSHYLGMWVNFIISSLVLTTSVALLAKRMRRQDAQLAFMREAQLR 194

Query: 198 DQQLLAVATQAAGAAHELGTPLATMSVLLKEMRQ--DHPDPLLQDDLSVLQDQVKLCKET 255
            ++L+A+ T +A  AH L TPLA+M +L+ E+++  D   P LQ+    +Q  + +C+ T
Sbjct: 195 QEKLIALGTASAQMAHRLATPLASMRLLVDELQEEADGNGPALQE----MQSALTVCEST 250

Query: 256 LQQLVRAAEANRRLAVEMQDVTDWLDEALNRWHLMRPEASYRFQRLGQGTVPRMAPPPDL 315
           L  L  A E+ R  A  ++     L     + +L+ P      +        ++     L
Sbjct: 251 LTALRSATESIREGAQRLESAEQLLSGLSEQVNLLMPAVKLSLEPDDGLDRLQLRVDASL 310

Query: 316 TQALLNLLNNAADACPEG-----LQVTLDWNAEDLTISIRDHGAGVPLAIAEQIGKPFFT 370
             ALL L+ N A A  E      +  +     ++L + +RD G G+P ++ +Q+G     
Sbjct: 311 QPALLALIENGARASQEATGEQKVSFSAQRQGDELVLGVRDFGPGIPASLVQQLGHQII- 369

Query: 371 TKGKGFGLGLFLSKASVTRAGGSVKLYSHEEGGTLTELRLP 411
            + KG G+ L LS AS+ R GG + L SH +GG + ++ LP
Sbjct: 370 EEPKGMGVALLLSHASLERLGGRLILGSHVDGGAVAQVYLP 410