Pairwise Alignments

Query, 420 a.a., Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 51/329 (15%)

Query: 139 AQFYPLETFPIARENLQIYGMWLSFALAAAVITFFAAR--MAEELRRQEELRAI------ 190
           A +  +E FP+  E+ Q+  + L       + +++ A+  ++E+L ++    ++      
Sbjct: 100 AMYQNIEFFPLDIEDHQVKTVCLIVQDVTELASYYQAQKCLSEQLEQEHTALSLLNKKLE 159

Query: 191 -RREEGLRDQQLLAVATQAAGAAHELGTPLATMSVLLKEMRQDHPDPLL----------- 238
             + + L+ ++++A+   AAG AHE+  P+  ++  L+ + QD+ + LL           
Sbjct: 160 AAQNQLLQSEKMVAIGQLAAGVAHEINNPIGFVNSNLQSL-QDYNNKLLKLLNFYQKLTH 218

Query: 239 -----------QDDLS------VLQDQVKLCKETLQQLVRAAEANRRL-AVEMQDVTDW- 279
                      QD L       +  D   L +E+++ L R A   + L +    D ++W 
Sbjct: 219 KIGSVPYFTLEQDMLKRYQFEFICSDLPDLIRESIEGLDRVAVIVKSLKSFSHVDSSEWQ 278

Query: 280 ----LDEALNRWHLMRPEASYR--FQRLGQGTVPRM-APPPDLTQALLNLLNNAADACPE 332
               ++   N   +   +  Y+    R  Q  +P +   P  L Q  LNLL NAA A  E
Sbjct: 279 YANVIEGIENTLKIAANQIKYKAVVLRNFQDNLPELYCQPMQLNQVFLNLLVNAAQAIEE 338

Query: 333 GLQVTLDWNAED--LTISIRDHGAGVPLAIAEQIGKPFFTTK--GKGFGLGLFLSKASVT 388
             ++++D +A D    I IRD G+G+  +   +I +PF+TTK  G G GLGL LS + V 
Sbjct: 339 RGEISIDVSASDAEFIIVIRDTGSGIAASDLRKIFEPFYTTKLVGTGTGLGLSLSYSIVQ 398

Query: 389 RAGGSVKLYSHEEGGTLTELRLPRVARGD 417
           +  G +K+ S    GT   + LP ++  D
Sbjct: 399 KHKGEIKVSSVLGEGTAFTVILPILSPED 427