Pairwise Alignments

Query, 420 a.a., Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 463 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  152 bits (385), Expect = 2e-41
 Identities = 116/429 (27%), Positives = 195/429 (45%), Gaps = 28/429 (6%)

Query: 10  ATRQNLWRLTFIRTLVLAAQAGSVGLAYWFDLLPLPWVQLAMTLGCSMLLCAFTAVRLRT 69
           +T   L  L  +R L +  Q  ++ +A     L L +  L + +G S +           
Sbjct: 15  STWVRLRTLILLRWLAITGQIVTIAVASQILNLTLNYGLLYLAIGASFIANTIAMFVYPE 74

Query: 70  SWPVTELEYAVQLACDLFIHSALLYFSGGSTNPFVSYYLVPLTIAAVTLPWRYSVILSGI 129
           +  ++E E  + L  D+   + LLY +GG  NPF    L P+TI+A TL  R +++L  +
Sbjct: 75  NKRLSENEAMLTLLFDVSQLAFLLYLTGGLNNPFALLILAPVTISAATLRLRSTMLLGAV 134

Query: 130 ALALYTLLLAQFYPLET---FPIARENLQIYGMWLSFALAAAVITFFAARMAEELRRQEE 186
           A+ L TL+     PL T   F +   ++ ++G W +  +    +  +A R+  E     E
Sbjct: 135 AIVLITLVAFLHVPLRTEQGFILRMPDVLVFGFWCAIVIGVMFLGAYAYRVTGETNSMSE 194

Query: 187 LRAIRREEGLRDQQLLAVATQAAGAAHELGTPLATMSVLLKEMRQDHPDPLLQDDLSVLQ 246
                +    R+Q+L  +    A AAHELGTPLAT+ ++ +E+ ++  DP+L++D  +++
Sbjct: 195 ALLATQMALAREQKLTDLGGVVAAAAHELGTPLATIKLVSQELAEELEDPILREDAELIR 254

Query: 247 DQVKLCKETLQQLVRAAEANRRL--AVEMQDVTDWLDEALNRWHLMRPEASYRFQRLGQG 304
           DQ   C++ L+ + RA + +  L  A     V +  D    R   +  + S      G  
Sbjct: 255 DQADRCRDILRSMGRAGKDDLHLKTAPLAAVVREAADPHAQRGKTLHFDISP--APGGSN 312

Query: 305 TVPRMAPPPDLTQALLNLLNNAADACPEGLQVTLDWNAEDLTISIRDHGAGVPLAIAEQI 364
             P +   P++   + NL+ NA D     + + L W  + + + I D G G P  +  +I
Sbjct: 313 QQPIIQRQPEIIHGIRNLVQNAVDFAEANVWIDLHWTDDVILVRIIDDGEGYPTHLLGRI 372

Query: 365 GKPFFTTKG----------KGFGLGLFLSKASVTRAG-------GSVKLYSHEE----GG 403
           G PF   +           +G GLGLF++K  + R G       GS      EE    GG
Sbjct: 373 GDPFVRKRKTQTDSRRPGYEGMGLGLFIAKTLLERTGAELSFANGSDPFLPREERPVRGG 432

Query: 404 TLTELRLPR 412
            + E   PR
Sbjct: 433 AIVEAIWPR 441