Pairwise Alignments

Query, 186 a.a., Dna binding response regulator PrrA (RegA) from Pseudomonas fluorescens FW300-N1B4

Subject, 183 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  153 bits (387), Expect = 1e-42
 Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 3/176 (1%)

Query: 12  LPHLLLVDDDATFTRVMARAMARRGFRVTTAGSAEEGLTIAQADIPDYAALDLKMDGDSG 71
           +  LL+++DD     ++AR + R GF    +  A   L +A+   P +  LD+K+   +G
Sbjct: 1   MKRLLIIEDDQALAGILARRLTRHGFECRLSHDASSALLVARECCPTHILLDMKLAEANG 60

Query: 72  LVLLPKLLELDPEMRVVILTGYSSIATAVEAIKRGACNYLCKPADADDVLAAL-LSEHAD 130
           L L+  L  L P++ +V+LTGY+SIATAVEAI+ GA NYL KP D   +LAA  L  H++
Sbjct: 61  LSLIVPLRNLLPKVVMVLLTGYASIATAVEAIRLGADNYLAKPVDTQTLLAAFELDVHSN 120

Query: 131 --LDTLVPENPMSVDRLQWEHIQRVLTEHEGNISATARALGMHRRTLQRKLQKRPV 184
              +  V ++P++  RL+WEHIQ+VL  ++GN+SATAR LGMHRRTLQRKL K+PV
Sbjct: 121 NLQEDDVDDSPLNPKRLEWEHIQQVLNANQGNVSATARQLGMHRRTLQRKLLKKPV 176