Pairwise Alignments

Query, 186 a.a., Dna binding response regulator PrrA (RegA) from Pseudomonas fluorescens FW300-N1B4

Subject, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 10/161 (6%)

Query: 12  LPHLLLVDDDATFTRVMARAMARRGFRVTTAGSAEEGLTIAQADIPDYAALDLKMDGDSG 71
           + HLL++DD+     ++   M   G+ V  AGS EEGL +   +      LD++M G  G
Sbjct: 1   MKHLLVIDDEPGHRLMVRAVMEDVGWHVVEAGSGEEGLELLVHEQVHVVLLDMRMPGMDG 60

Query: 72  LVLLPKLLELDPEMRVVILTGYSSIATAVEAIKRGACNYLCKPADADDVLAALLSEHADL 131
              L ++LE+ P + VV+LT Y ++ +AVEA+K GA +YL KPAD ++ L A+L +  + 
Sbjct: 61  QETLARILEIQPGLPVVMLTAYGTVGSAVEAMKCGAFDYLTKPADNEE-LVAVLEKAWEH 119

Query: 132 DTLVPENPMSVDRLQWEHIQRVLTEHEGNISATARALGMHR 172
             LV EN         E +++   E++        +  MHR
Sbjct: 120 RRLVVEN---------EELRKRYVENDPTAPLVGASQVMHR 151



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 139 PMSVDRLQWEHIQRVLTEHEGNISATARALGMHRRTLQRKLQK 181
           P S+D  +   + R L  H G+   TA ALG+ RRTLQ KL+K
Sbjct: 410 PCSLDEAEKGELLRALDVHGGHREKTADALGISRRTLQYKLKK 452