Pairwise Alignments

Query, 1267 a.a., FIG005080: Possible exported protein from Pseudomonas fluorescens FW300-N1B4

Subject, 1436 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  215 bits (547), Expect = 3e-59
 Identities = 281/1330 (21%), Positives = 518/1330 (38%), Gaps = 142/1330 (10%)

Query: 18   LCALVLVLMALFVSLGRELTPLVAEYRADIEDKASDALGMPLQIGKLEGNWSGFAPVLLA 77
            + A+++VL AL VSL R L P + + R ++     +   + +++ +L   W  F P +  
Sbjct: 17   MIAIIVVLFALSVSLFRGLLPKLDQVRQELVSYIYEQYQVKVEVSELTAEWQAFGPAVTI 76

Query: 78   HDVMVGEGSN---ALRLDQVRAVPDLWASLLAREVRIAHLELNGLKISL-----KEGEDG 129
             ++++    N      +D V    D W SL++   +I ++   G+KI+L      +  +G
Sbjct: 77   KNLVLPVQENLPVTFIIDNVHLKLDFWDSLVSASPQIENVIFEGVKIALDLDRISQAGNG 136

Query: 130  HWALEGLPVQQDQPLNPEQLLNRMQRVQQLSVLDSQITLQPLGESPLTLTYVGLNLKTGP 189
              + +    +Q+       +L +  R    ++ D  + L         +    L  +   
Sbjct: 137  QQSSDAPVAEQNTDWLYALMLEQFDR---FAITDVTMQLISSTHKYRPIHIRDLRWRNLA 193

Query: 190  SRQRLDARLTLPD--GQPVAMSLRTRLRAAQWKDGE------ADAYLSLPQSDWSKWLPE 241
             R R +  L L +   +   +SL   +R     DG          YL+    D  +W   
Sbjct: 194  GRHRAEGALFLDEQASEVERLSLAVDIRG----DGHNPESLTGQLYLAANSLDLGEWASR 249

Query: 242  RLTQQWNFSEIKAGG----ELWVNWSKGTLQRAAIRLNAP----QLKGAYAERKPIQINN 293
            +     +  ++   G    + W  +S      A +         QLKG   E++  +I  
Sbjct: 250  QENPYASGKKLPLEGVVNLQAWAEFSNRAFTAATVAFEPSWLQWQLKG---EQQKFEIKA 306

Query: 294  LALNGYFQRSSTGVLVTLDSLAMNLGDSRWESKLQFQQTAATDKAPELLHLQADRLDLTP 353
              LN  +Q   +G  +T   LA       W +           K  + L    ++LD   
Sbjct: 307  GQLN--WQPQVSGWQLTSSDLAFVTNGQAWPAL-----HIGARKRDDRLMASINQLDAEV 359

Query: 354  LTPLLNALGPLPEGVATAVERLKVTGVLRNVLIDFRPAATDDTKFSFAANLEKV---GFD 410
            L PLL  +  +        + +   G +  + + +     +   F+ +A L++    G  
Sbjct: 360  LLPLLPLVPGMDLDGLYLWQSMDPKGSIEQLKLGYG----EQQGFALSAQLKQFAWQGSG 415

Query: 411  AYRGAPAVRNVSGSISGDLGQGELRMDSKDFSLHLDPIFAKPWQYIQANARLTWKLDKEA 470
            A  GA  +  + G    DL    L   ++ + L  +  F +      A    T K     
Sbjct: 416  AIPGAEPIDLMLGMQGSDL---YLSAPAQQYHLDFNGGFEEALSL--AGDAFTVKYALGE 470

Query: 471  FTLIAPYLKVLGEEGKIAGDFLIRLHFDHAREDYMDLRVGLVDGDGRYTAKYLPT-VLSP 529
              LIAP L     +     D    +  D A E  ++L   +   +      Y P   +S 
Sbjct: 471  AELIAPKLHFYNADL----DLDAAMKLDFAGEASLNLLADVQVKNAARAKYYFPKHAMSE 526

Query: 530  GLDEWLRTAILKGAVDEGFFQYQGSLNHGAAETARSI-SLFFKVHDAELAFQPGWPHVSK 588
             L ++L  AI  G   +    + G L H   +    +    F ++ A   FQP WP V++
Sbjct: 527  SLVDYLSGAIKAGQSQDAKVVWNGPLKHFPYDDNSGVFQAGFSLNQARYRFQPDWPEVTE 586

Query: 589  VSGDVFIEDSGVRILASEGQLLDTQVSDVYVNIPRVPAGQSTHLFLDGAFAGGLGDGLKI 648
            +S +   E++ + I  ++G L+       +V IPR+     T L +            ++
Sbjct: 587  LSLNALFENAAMDIWVNKGMLMQVPADGAHVAIPRM--SHQTLLTVKADLRTQGEAAKQV 644

Query: 649  LQEAPIGTADTFAGW----EGEGDLQGKLKLDIPLVKGEQPKILVDFKTAKARLKLSEPT 704
            LQ +P+  ADT        + +G++ GKL L IPL  G +  IL   K     + +SEP 
Sbjct: 645  LQRSPL--ADTVGATLEVVQVQGEVSGKLDLSIPLYHGGKEAILGQVKFDNTPVYISEPG 702

Query: 705  LELTHLKGDFRFDSSKGLSGQKITARAFDKPVTAQIFAEGSPGKLNTRVAATSEVEVKKL 764
            ++L  + G+  F +++ ++G+KI AR F++PV+         GK N       +++    
Sbjct: 703  VQLDGVTGEVYF-ANEVVTGEKIQARLFEQPVSFTF----DTGKTNKHYGLNLDMQ---- 753

Query: 765  TEWLNVTQPLPV--------TGTIPYQLQLNL----AGADSQLMVSSNLKGAAVDLPAPF 812
             +W   + P  +        +G + +Q  + L     G   Q  V S+++G  + LP  F
Sbjct: 754  GQWALASLPAMLDNPLKDYYSGELDWQGAMTLIFDELGYRIQAQVKSDMQGVELSLPGKF 813

Query: 813  GMAADVGRDTVFRMTLQGPERRYWATYGDLASFTFAAPAGNFADGRGE----LFLGGGSA 868
               AD  R   F +     +    A  GD   F      G F +  G+      L  G  
Sbjct: 814  AKTADSPRALSFELIGDNKQASLGAKLGDQMEFW-----GGFDEESGDHLAHFDLLLGRL 868

Query: 869  VLPGAKGLRVRGVLSELDV-----APWQDLVTKYAGQDPGGSAKQL-------------- 909
              PG +  R  G L +LD+     APW  ++  + G     S+  L              
Sbjct: 869  FKPGDQLKRQAGHL-QLDMPATEFAPWLPIIKGFMGDAALESSLDLAMREALAEQAPESP 927

Query: 910  ----------------LSGADLKVGKLTGFGTTLDQASVQLTRKPTAWALQLDSQQAKGS 953
                            L   D +V +L  +G  L + +++       W  + ++ +  G 
Sbjct: 928  LVQAETEPKKSSFFPPLIAVDGQVRQLNLYGQPLTELNLEAHPTEHGWRFEGNANEFSGR 987

Query: 954  VGI-PDAKAAPIAVNLQYIRLPARDPTALADENSPDPLATVDPTKIPALDVTINQLFQGP 1012
            V   PD     + +               A E + D + ++    +P L V ++Q     
Sbjct: 988  VDFYPDWSTQGLKLVASRFNFAPESKEGEASEVASDEVLSI----LPPLAVDVDQFSVYG 1043

Query: 1013 DLVGGWHLKVRPTDKGVAFNALDLGLKGILLRGSGGWEGVPGNSSSWYKGRVSGKNLADV 1072
              +G   L+  P +       + +   GI L+G G W    G + + ++  +  K   +V
Sbjct: 1044 KPLGHLVLQATPKNGDYQIQTIAITTPGITLKGKGAWSNSEGQNLTEFQVDLKAKQFDEV 1103

Query: 1073 LKGWGFAPSVTSEEFHMDVDGRWPGSPAWLATKRFSGSLDASLNKGQFVEVEGGAQALRV 1132
             +  G  P +      +  +  W G+P   + +  +G +   L KG   EV    +  R+
Sbjct: 1104 SERLGIDPGLKEAPLDLQAELSWQGAPYAFSLETLNGQISYKLGKGHLSEVSD--KGARI 1161

Query: 1133 FGLLNFNSIGRRLRLDFSDLFGKGLSYDRVKGLLVASNGVYVTREPILLTGPSSNVELNG 1192
            F L + +S+ R+L LDFSD+FGKGL ++   G L   NGV  T +   +   + N+ + G
Sbjct: 1162 FSLFSLDSLLRKLSLDFSDVFGKGLYFNAFTGTLKLDNGVVKTTDS-EMDAVAGNMRVRG 1220

Query: 1193 TLDLVGDQIDAKLLVTLPVTNNLPIAALI-VGAPAVGGALFLIDKLIGDRVARYASVKYT 1251
              DL  + ++  +     + +++P   L+  G   +G   F + K++   +   + +++ 
Sbjct: 1221 YTDLTTESLNYDIRFVPQLASSVPTVVLLSTGGWTLGLGAFALTKVLEPVIEVISEIRFR 1280

Query: 1252 VKGPWKDPKI 1261
            + G   +PK+
Sbjct: 1281 LTGTMSEPKL 1290