Pairwise Alignments

Query, 1267 a.a., FIG005080: Possible exported protein from Pseudomonas fluorescens FW300-N1B4

Subject, 1390 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  210 bits (535), Expect = 6e-58
 Identities = 268/1303 (20%), Positives = 511/1303 (39%), Gaps = 95/1303 (7%)

Query: 11   LTRWGLGLCALVLVLMALFVSLGRELTPLVAEYRADIEDKASDALGMPLQIGKLEGNWSG 70
            L+R+   L AL+LVL AL VSL R L P V E R  + +       + +Q+G+L   W  
Sbjct: 10   LSRFCWQLLALILVLFALTVSLIRGLLPQVDEVRQQLVEYVKSEYQINIQVGELSAQWQA 69

Query: 71   FAPVLLAHDVMVGEGSN---ALRLDQVRAVPDLWASLLAREVRIAHLELNGLKISL---K 124
            F P +   D+++         + + QV+   D W SLL    RI  +   G+ I+L   K
Sbjct: 70   FGPAVTIDDLVIPPQEKLPVTVLVKQVQIKLDFWQSLLTTSPRIEDVNFEGVHIALDMDK 129

Query: 125  EGEDGHWALEGLPVQQDQPLNPEQLLNRMQRVQQLSVLDSQITLQPLGESPLTLTYVGLN 184
                    + G   Q D        +  ++++++ S+ D+ + L  L      +    LN
Sbjct: 130  LSGRTTGRVSGQSTQTDW-----LYILLLKQLERFSLEDASVQLLSLHNEYRPIHIRHLN 184

Query: 185  LKTGPSRQRLDARLTLPDGQPVAMSLRTRLRAAQWKDGEADA--------YLSLPQSDWS 236
             +    + R    + L +   V  SL  +L       G+A A        YL+    D  
Sbjct: 185  WRNSGMQHRGAGEIYLDNNAMVKESLSLQLDIT----GDATAPDTLKGQIYLAAQSLDLG 240

Query: 237  KWLPERLTQQWNFSEIKAGG----ELWVNWSKGTLQRAAIRLNAPQLKGAYAERKPIQIN 292
            +W   +        ++   G    + W + +  +++   ++     L+ +  + +P +  
Sbjct: 241  EWASRQPNPYDPSKKLPLEGIVNLKAWFDVAHRSIRSGLVQFEPSWLQWS-MQGQPQKFE 299

Query: 293  NLALNGYFQRSSTGVLVTLDSLAMNLGDSRW-ESKLQFQQTAATDKAPELLHLQADRLDL 351
              + +  ++  +TG  ++   L        W E KL      A  +  + L+    R+DL
Sbjct: 300  IQSGSIRWEPKATGWEISSADLDFVTNGEHWPELKL------AAKQQDDALYAYVSRVDL 353

Query: 352  TPLTPLLNALGPLPEGVATAVERLKVTGVLRNVLIDFRPAATDDTKFSFAANLEKVGFDA 411
              L PLL    PL  GV  AV +          +   R     D     + ++ ++ +  
Sbjct: 354  PTLFPLL----PLFPGVDLAVLKQWFHLAPEGSVGPIRLYQAADQPLLASTSVTQLHWQK 409

Query: 412  YRGAPAVRNVSGSISGDLGQGELRMDSKDFSLHLDPIFAKPWQYIQANARLTWKLDKEAF 471
              G P  + +   +          +  + ++L     F+ P   +   A LT   D +  
Sbjct: 410  VEGIPNTQPLDLKLQWQDETLVFSLPEQTYTLDFGDEFSAP--LVLQGAELTGAFDTKRA 467

Query: 472  TLIAPYLKVLGEEGKIAGDFLIRLHFDHAREDYMDLRVGLVDGDGRYTAKYLP-TVLSPG 530
            TL  P++++  ++  I     ++L F  A    M L   +   +     KY P   +   
Sbjct: 468  TLSMPHVQLANDD--IGLSAALKLDFSTAAS--MSLAANVAVKNAANADKYFPIKAMGES 523

Query: 531  LDEWLRTAILKGAVDEGFFQYQGSLNHGAAETARSI-SLFFKVHDAELAFQPGWPHVSKV 589
            L E+L  AI  G        +QG+L+    E    +    F +++AE  FQP WP V+ +
Sbjct: 524  LAEYLDGAIKAGQSQNAQVLWQGALSSFPFEDNSGVFQAAFTLNNAEYQFQPDWPAVTDL 583

Query: 590  SGDVFIEDSGVRILASEGQLLDTQVSDVYVNIPRVPAGQSTHLFLDGAFAGGLGDGLKIL 649
            S D   E++ + I  ++G+L++      +V IP +  G+ + L +            K+L
Sbjct: 584  SLDALFENARMDIWVNQGKLMNVVADGAHVFIPEL--GERSLLKIQADLVTDGSAATKVL 641

Query: 650  QEAPIG--TADTFAGWEGEGDLQGKLKLDIPLVKGEQPKILVDFKTAKARLKLSEPTLEL 707
            Q +P+     +T    + +G + G L + IPL +GE   I          + +++P L+L
Sbjct: 642  QASPLADTVGETLKVVQVQGAVAGNLDISIPLYEGEAEDIRGQIVFDNTPVFIAQPGLQL 701

Query: 708  THLKGDFRFDSSKGLSGQKITARAFDKPVTAQIFAEGSPGKLNTRVAATSEVEVKKLTEW 767
              + G  +F +++ + GQ I +R F++P+      +         +   S  ++ +L + 
Sbjct: 702  KAVTGTVQF-ANEVVEGQGIKSRLFEQPLEFSFATKPEGKDFTLNLDMKSRWDLSRLPQE 760

Query: 768  LNVTQPLPVTGTIPYQLQLNLA----GADSQLMVSSNLKGAAVDLPAPFGMAADVGRDTV 823
            L+        G + +   L++     G   Q  + S+L GA + LP  F    D  R  +
Sbjct: 761  LHNPLSGFYQGKVAWGGNLSMVFDEQGYQIQANLGSDLVGATLKLPGVFAKPTDEPRPLM 820

Query: 824  FRMTLQGPERRYWATYGDLASFTFAAPAGNFADGRG------ELFLGG--GSAVLPGAKG 875
               +               A F      G F   +G      +L LG    +  +P  + 
Sbjct: 821  AEFSGDQQAAILRVKLDKQAEF-----IGGFEAEKGTQFSYFDLLLGRLFEATEVPNTEL 875

Query: 876  LRVRGVLSELDVAPWQDLVTKYAGQDPGGSAKQLL-------------SGADLKVGKLTG 922
              +   ++   +A W  ++  + G D       +L              G D  +GK   
Sbjct: 876  GHINIDVTSGKLAHWLPVINAFIGTDNKPVRTGILVEKANHSALFPAVVGIDANIGKFDL 935

Query: 923  FGTTLDQASVQLTRKPTAWALQLDSQQAKGSVGI-PD--AKAAPIAVNLQYIRLPARDPT 979
             G  L    +        W     + + +G++   P+   +   +A +  Y         
Sbjct: 936  LGQGLTDLRLSANPNDNGWRFDAKASEFEGTIDFYPNWMTQGLKVAASKFYF------SP 989

Query: 980  ALADENSPDPLATVDPTKIPALDVTINQLFQGPDLVGGWHLKVRPTDKGVAFNALDLGLK 1039
             +  E   D  A    T +P + V ++         G   ++  P   G     L L   
Sbjct: 990  EVKSEGEADFAADQVLTNLPPVAVNVDDFRFFDKSFGKLVVQASPQASGYRIQTLSLTTP 1049

Query: 1040 GILLRGSGGWEGVPGNSSSWYKGRVSGKNLADVLKGWGFAPSVTSEEFHMDVDGRWPGSP 1099
             + L+G+G W+   G + +     ++      +    G  P V      ++ D  W G+P
Sbjct: 1050 EVSLQGNGIWQQQNGQNQTELSVSLNASQFHHLSDQLGINPGVDEAPLKVNADLAWQGAP 1109

Query: 1100 AWLATKRFSGSLDASLNKGQFVEVEGGAQALRVFGLLNFNSIGRRLRLDFSDLFGKGLSY 1159
               + +  +G +   L KG   +V    +  R+F L + +S+ R+L LDFSD+FG+G+ +
Sbjct: 1110 YAFSLETLNGKVKFELGKGHLSQVSD--KGARIFSLFSLDSLVRKLSLDFSDVFGQGMYF 1167

Query: 1160 DRVKGLLVASNGVYVTREPILLTGPSSNVELNGTLDLVGDQIDAKLLVTLPVTNNLPIAA 1219
            +   G L   NGV  T +   +   + N+++ G  DL  + ++  +     + +++P   
Sbjct: 1168 NSFTGNLQIDNGVVKTTD-TEMDAIAGNMKVRGYTDLTTESLNYDIRFVPQLASSVPTVV 1226

Query: 1220 LI-VGAPAVGGALFLIDKLIGDRVARYASVKYTVKGPWKDPKI 1261
            L+   A  +G   F + K++   +   + +++ VKG   +P +
Sbjct: 1227 LLSTSAWTLGLGAFALTKVLEPVIEVISEIRFRVKGTMSEPVV 1269