Pairwise Alignments

Query, 359 a.a., FIG00954456: hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 351 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  236 bits (602), Expect = 7e-67
 Identities = 135/346 (39%), Positives = 186/346 (53%), Gaps = 5/346 (1%)

Query: 15  AGPRALARIRANGLSAADVGTLPGAAGGPKALGIQGLDLALFGEWLPAAPRERSLIGASV 74
           AGP A  +I   GL       +  A+GGPK LGI  LD  LFG +  A       +GAS 
Sbjct: 8   AGPTAYKQIAEQGLKPELFTQVLAASGGPKWLGIAALDKYLFGTYFKARQTPLYTLGASS 67

Query: 75  GSWRFASACLPDAAEGIRRLGHLYTEQNFAKGVTMAQISQSSRRMLDDLLDGRD-ASILD 133
           G+WR A     D      RL   Y  Q +    T +++S+    ++  +L  +  A I+ 
Sbjct: 68  GAWRLACLAQQDPLAAYERLEREYIGQRYETKPTASEVSRKVAGIVSGILGAQQGADIVS 127

Query: 134 NAHYRLNIMVVKSHGLLADDHRGRLGLGLSSVIADNLRGRARLSRHFERLIIHDPRLAPP 193
           N   + + +  +   L    HR  LG GL++    NL  R  L  HFER +     +A P
Sbjct: 128 NPVIKSHFIACRGRHLNRLSHRAALGAGLATTAVTNLLSRRTLGWHFERYLFGSGGVASP 187

Query: 194 VNALNDFPSRFVALDAGNLRQALLASGSIPMVMQGVRDLPGAGAGTFRDGGLLDYHLDLP 253
            N L D P R +AL   N+ Q LLA+GSIP V+  V  + GA AG + DGG+ DYH DLP
Sbjct: 188 FNELKDLPGRHLALTGENIAQVLLATGSIPWVLAPVERIEGAPAGHYYDGGITDYHFDLP 247

Query: 254 YS-GNDIVLYPHFTDRVIPGWFDKTLPWRRACPARLQDVLLLAPSKEYLSRLPYGKLPDR 312
            +    + LYPHF  +++PGWFDK+LPWRRA      + L+LAPS+EYLS+LPYGKLPDR
Sbjct: 248 LAHAPGLTLYPHFYSKILPGWFDKSLPWRRA-KHNYDNALILAPSEEYLSQLPYGKLPDR 306

Query: 313 NDFKRFMGDAPSRQKYWRATMDESRRLGDEFLELTANGRLGERLLT 358
           NDF R   D+  R +YWR  +  S  L ++  ++  +G +   + T
Sbjct: 307 NDFSRL--DSEERIRYWRQAVQMSEVLAEDLDKVLNSGDIMRHINT 350