Pairwise Alignments

Query, 155 a.a., Uncharacterized ABC transporter, periplasmic component YrbD from Pseudomonas fluorescens FW300-N1B4

Subject, 157 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (314), Expect = 3e-34
 Identities = 67/156 (42%), Positives = 99/156 (63%), Gaps = 3/156 (1%)

Query: 1   MQNRTLEIGVGLFLLAGILALLLLALRVSGLAPTASTDTYKLYAYFDNIAGLTVRAKVTM 60
           M  R +E+ VGLF+L+G++A L+L   V+ +        Y LYA F NI GL VR+ V +
Sbjct: 1   MLTRKIELLVGLFILSGLMAFLVLVFNVANVEVKPGQSHYTLYAKFTNIGGLKVRSPVKV 60

Query: 61  AGVTIGKVTAIDLDRDSFTGRVTMQLEKRVDNLPTDSTASILTAGLLGEKYIGISVG--- 117
            GV +G+VT I LD +     V + ++ + D  P  S+ SILT+GLLGE+++G++ G   
Sbjct: 61  GGVVVGRVTNISLDPEELVAVVELAMDNQYDQFPETSSLSILTSGLLGEQFLGLTPGFVM 120

Query: 118 GEETLLKEGGTIHDTQSSLVLEDLIGKFLLNTVSKD 153
            +  +LK+G  I DT S+LVLEDLIG+FL +  SK+
Sbjct: 121 DDIGMLKDGDRIDDTHSALVLEDLIGQFLYSMKSKE 156