Pairwise Alignments

Query, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

Subject, 328 a.a., tRNA-dihydrouridine synthase from Azospirillum brasilense Sp245

 Score =  298 bits (763), Expect = 1e-85
 Identities = 159/321 (49%), Positives = 209/321 (65%), Gaps = 4/321 (1%)

Query: 3   AVRIGPYTLTNPLILAPMAGVTDQPFRQLCRRFGAALVVSEMLTSDMRLWNSRKSRLRMP 62
           A++IG  +L  P+ILAPM+GVTD PFR+L ++ G  LVVSEM+ S   +  +R++ LRM 
Sbjct: 2   AIQIGTISLEGPVILAPMSGVTDLPFRRLVKQSGCGLVVSEMVASQAMIRENRQT-LRMV 60

Query: 63  HADEPE--PRSVQIAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRD 120
              EPE  P +VQ+AG +P ++A+AA+ N + GA IIDIN GCP KKV N  AGS+LMRD
Sbjct: 61  EC-EPEQFPMAVQLAGCEPDVMAEAAKLNEDRGAAIIDINFGCPVKKVVNGHAGSSLMRD 119

Query: 121 ERLVGEILDAVVGAVDVPVTLKIRTGWDRQNKNGLTVARIAEQAGIAALAVHGRTRADLY 180
           E L   IL+A   AV +PVTLK+R GWD  + N   +ARIAE+ GI  + VHGRTR   Y
Sbjct: 120 EALAARILEATAKAVSIPVTLKMRKGWDDNSLNAPRLARIAEECGIKLVTVHGRTREQFY 179

Query: 181 TGEAEYDTIAAIKQAVSIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFREV 240
            G A++  I ++K+AVSIPV  NGDI S     + L  +G DG++IGR A GRPW   +V
Sbjct: 180 NGTADWSFIRSVKEAVSIPVVVNGDITSFDAVDRALAESGADGVMIGRGAYGRPWFPAQV 239

Query: 241 EHYLRTGELLAAPTLEEIEDTLLEHVQALHEFYGEVMGVRIARKHVGWYLATLPGARDFR 300
            HY+RTGE L  P L E  DTLLEH  A+   YG   G+R+ARKH+ WY   L  + +FR
Sbjct: 240 MHYIRTGERLPDPPLHEQLDTLLEHYDAMLTHYGVEGGLRVARKHISWYSTGLRDSAEFR 299

Query: 301 ARFNHLEDRDAQGFSIRQFFA 321
           +  N + D +     IR F+A
Sbjct: 300 SEVNRMSDPERVRGFIRDFYA 320