Pairwise Alignments

Query, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

Subject, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 36/322 (11%)

Query: 15  LILAPMAGVTDQPFRQLCRRFGA-ALVVSEMLTSDMRLWNSRKSRLRMPHADEPEPRSVQ 73
           L +APM   TD+  R   R   A  L+ +EM+T+   +         + +  E  P ++Q
Sbjct: 7   LSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDF---LAYNQEEHPVALQ 63

Query: 74  IAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRDERLVGEILDAVVG 133
             G +P+ LA  A+   E G   I++N+GCP+ +V N   G+ LM +  LV E + A+  
Sbjct: 64  FGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRA 123

Query: 134 AVDVPVTLKIRTGWDRQNKNGLT---VARIAEQAGIAALAVHGR--------TRADLYTG 182
            VD+PVT+K R G D Q+        +A +AE+ G     +H R         + +    
Sbjct: 124 VVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIP 183

Query: 183 EAEYDTIAAIKQAV-SIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFREVE 241
             +Y     IK+    + +  NG + S ++A   L    +DG++IGR A   P++  EV+
Sbjct: 184 PLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAK--LHLQHLDGVMIGREAYQNPYLLAEVD 241

Query: 242 HYLRTGELLAAPTLEEIEDTLLEHVQALHEFYGEV-----MGVRIAR--KHVGWYLATLP 294
                        +  +E  + +  Q +HE    +      G  +    +H+      +P
Sbjct: 242 Q-----------QIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMP 290

Query: 295 GARDFRARFNHLEDRDAQGFSI 316
           GAR +R   +    +   G  +
Sbjct: 291 GARQWRRHISENAHKPGAGLEV 312