Pairwise Alignments

Query, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

Subject, 383 a.a., dihydrouridine synthase DuS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  137 bits (345), Expect = 4e-37
 Identities = 82/234 (35%), Positives = 119/234 (50%), Gaps = 2/234 (0%)

Query: 6   IGPYTLTNPLILAPMAGVTDQPFRQLCRRFGAALVVSEMLTSDMRLWNSR--KSRLRMPH 63
           +G  T+   L LAPMAG+    FR++   +G   ++   + +   +   R  KS      
Sbjct: 40  VGGRTVPGRLWLAPMAGLGHAAFREVVEDYGGCGLLFTGMCNARAVPTERPEKSEAFSWR 99

Query: 64  ADEPEPRSVQIAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRDERL 123
           A EP     Q+ G +P+ +A+ ARR    G   +D+NMGC    +  +  G+ L+RD   
Sbjct: 100 AGEPPRLVCQLFGAEPEHMAEGARRVQAEGFFGVDLNMGCSVSAIIKRGCGADLLRDPER 159

Query: 124 VGEILDAVVGAVDVPVTLKIRTGWDRQNKNGLTVARIAEQAGIAALAVHGRTRADLYTGE 183
              ++ AV  AVD+PV +K RTGW    +  + +AR  E AG   L  H R   D  T  
Sbjct: 160 AVRMVAAVRRAVDIPVFVKFRTGWSPDPQPAVDLARRFEDAGADCLVFHPRVAPDRRTQP 219

Query: 184 AEYDTIAAIKQAVSIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIF 237
                I  +K AVSIPV  NGD+ +P+  A +L  TG DG+ +GR A  RPW+F
Sbjct: 220 PRRAHIGLVKAAVSIPVMGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARPWVF 273