Pairwise Alignments

Query, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

Subject, 341 a.a., tRNA-U20-dihydrouridine synthase from Sphingomonas koreensis DSMZ 15582

 Score =  265 bits (678), Expect = 1e-75
 Identities = 138/327 (42%), Positives = 196/327 (59%)

Query: 1   MSAVRIGPYTLTNPLILAPMAGVTDQPFRQLCRRFGAALVVSEMLTSDMRLWNSRKSRLR 60
           +  ++IGP T+  P++LAPM GVTD PFR+L RR+G+ L V+EM+ S   +  +R+S  +
Sbjct: 4   LKPIQIGPVTVETPVLLAPMTGVTDLPFRRLVRRYGSGLNVTEMIASQAAIRETRQSIQK 63

Query: 61  MPHADEPEPRSVQIAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRD 120
                  EP S+Q+ G  P  + +AA+ N + GA IIDINMGCP +KV N  AGSALMR 
Sbjct: 64  AAWDPIEEPVSMQLVGCTPYEMGEAAKLNEDRGAAIIDINMGCPVRKVTNGDAGSALMRV 123

Query: 121 ERLVGEILDAVVGAVDVPVTLKIRTGWDRQNKNGLTVARIAEQAGIAALAVHGRTRADLY 180
             L  ++++A V AV VPVT+K+R GW   + N   +AR+AE  G   + VHGRTR  +Y
Sbjct: 124 PDLAAKLIEACVKAVKVPVTVKMRMGWCHDSLNAPELARVAEDIGAQMITVHGRTRNQMY 183

Query: 181 TGEAEYDTIAAIKQAVSIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFREV 240
            G A++  +  +K AVSIPV  NGDI SP  A   L  +G DG++IGR A GRPW+ R+V
Sbjct: 184 KGSADWAFVRKVKDAVSIPVIVNGDICSPDDARTALEQSGADGVMIGRGAYGRPWLLRQV 243

Query: 241 EHYLRTGELLAAPTLEEIEDTLLEHVQALHEFYGEVMGVRIARKHVGWYLATLPGARDFR 300
              L        P+++E    + EH   + + YGE+ GV + RKH+GWY   L G+ +FR
Sbjct: 244 MDALTGQGEREDPSIDEQYALIAEHYATMLDHYGEMTGVNLMRKHIGWYTKGLHGSAEFR 303

Query: 301 ARFNHLEDRDAQGFSIRQFFAEQRSGP 327
            + N           + +F+A+ R  P
Sbjct: 304 NKVNQEAKAATVLAMLDEFYAQFRGKP 330