Pairwise Alignments

Query, 337 a.a., putative TIM-barrel protein, nifR3 family from Pseudomonas stutzeri RCH2

Subject, 364 a.a., tRNA-dihydrouridine synthase B from Cupriavidus basilensis FW507-4G11

 Score =  395 bits (1014), Expect = e-114
 Identities = 199/325 (61%), Positives = 241/325 (74%), Gaps = 5/325 (1%)

Query: 4   VRIGPYTLTNPLILAPMAGVTDQPFRQLCRRFGAALVVSEMLTSDMRLWNSRKSRLRMPH 63
           ++IGP+ L N L +APMAGVTD+PFRQLC+R GA   VSEM+ S+ +LW S K+  R  H
Sbjct: 1   MQIGPHQLRNNLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVASNAQLWKSEKTMRRANH 60

Query: 64  ADEPEPRSVQIAGGDPQMLADAARRNVELGAQIIDINMGCPAKKVCNKAAGSALMRDERL 123
             E EP +VQIAG +P M+A AAR NVE GAQIIDINMGCPAKKVCN AAGSAL+++E L
Sbjct: 61  TGEVEPIAVQIAGAEPAMMAQAARHNVERGAQIIDINMGCPAKKVCNVAAGSALLQNEPL 120

Query: 124 VGEILDAVVGAVD-----VPVTLKIRTGWDRQNKNGLTVARIAEQAGIAALAVHGRTRAD 178
           V  I+ AVV AV      VPVTLKIRTGWDRQN+N L +AR+ E AGI+ L VHGRTRAD
Sbjct: 121 VLRIVQAVVAAVAEVDPRVPVTLKIRTGWDRQNRNALRIARMVEDAGISMLTVHGRTRAD 180

Query: 179 LYTGEAEYDTIAAIKQAVSIPVFANGDIDSPQKAAQVLRATGVDGLLIGRAAQGRPWIFR 238
           LY GEAEY+TIAA+K A+SIPV ANGD+ +PQKA  VL  TG D ++IGRAAQGRPW+FR
Sbjct: 181 LYKGEAEYETIAAVKAALSIPVVANGDVTTPQKAKHVLAVTGADAIMIGRAAQGRPWLFR 240

Query: 239 EVEHYLRTGELLAAPTLEEIEDTLLEHVQALHEFYGEVMGVRIARKHVGWYLATLPGARD 298
           E+EHYL TGELL +P + EI   +  H++  ++FYGE  GVR ARKH+ WY   L GA  
Sbjct: 241 EIEHYLATGELLPSPEVAEIRAIMNAHLEDHYDFYGEFTGVRTARKHIAWYTRGLAGANL 300

Query: 299 FRARFNHLEDRDAQGFSIRQFFAEQ 323
           FR R N L+   AQ  ++ +FF EQ
Sbjct: 301 FRHRMNTLDSTTAQLAAVNEFFDEQ 325