Pairwise Alignments

Query, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

Subject, 933 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella loihica PV-4

 Score =  260 bits (665), Expect = 3e-73
 Identities = 164/519 (31%), Positives = 276/519 (53%), Gaps = 21/519 (4%)

Query: 424 KTKADFLSKISHELRTPMNGVLGMSELLLGTSLSAKQRDYVQTIHSSGNELLNLINEILD 483
           + K++FL+ +SHELRTP+NGV+G ++ LL T L A Q+DY++TI  S   LL +IN+ILD
Sbjct: 301 RIKSEFLANMSHELRTPLNGVIGFAKQLLKTPLHASQQDYIKTIEKSATNLLGIINDILD 360

Query: 484 ISKLESGQIELDDVQFDFNALIEDCLSIFRAKAEQQKVELISFIQPQLPQVVAGDPTRLR 543
            SKLE+G++EL+++ F    +I+D +S+    A+++ +EL+  I+P +   V+GD  R+ 
Sbjct: 361 FSKLEAGKMELENMPFALREVIDDTISLLANSAKEKDLELVVDIEPSINDNVSGDALRVS 420

Query: 544 QTLLNLLENAFKQTDEGEV-LLIAAVDGPQDNPRLRITVQDSGRPLEPYERDALLNAAVD 602
           Q + NL+ NA K TD G V L +       +   +R  + D+G  ++     A L  A  
Sbjct: 421 QVITNLVGNAIKFTDSGSVHLKMRLTSEEAEKVNVRCEITDTGIGIDK-PHQAQLFQAFG 479

Query: 603 SHDFLASTRHGGR-LGLIIARQLVQLMDGDFGIQTGTTQGNTLWISLPLASEGLAQNNAD 661
             D   S R GG  LGLII ++L+  M G  G  +   +G+T W +LPL       +   
Sbjct: 480 QADSSISRRFGGTGLGLIITKRLINRMGGQIGCISAPGKGSTFWFTLPLKLSPYPISQPL 539

Query: 662 LDGPLQGTRLLIVDDNDTCRKVLVQQCSAWGLEVSAVASGKEALALLRTKAHLREYFDVV 721
               L    +L+ +  +  RKV     S WG++  ++ + ++   L R       +FD  
Sbjct: 540 ETDNLIDKTVLLFEPRELSRKVHESLLSHWGMQNISITTAED---LARVAGEEGRHFDYA 596

Query: 722 LLD-QDMPGMTG-MQLASKIKEDSSLNHDILLIMLTGMGSAPSKIIARNAGIKRILAKPV 779
           ++   D+      + + +KI + S    D  L + +   SA +K+      + +++  PV
Sbjct: 597 IISCNDLASSPNLLNVLNKIAKIS----DYTLYLCSSTDSA-AKMSLIQPNVDKVMQAPV 651

Query: 780 AGYTLKTTLADELAQRLQSSQLRPALASPPLAPLEVPSDFRILVAEDNNISTKVIRGMLN 839
               L  TL +    + ++   + A+        +      +L  +DN  + K+I+ +L 
Sbjct: 652 GERALAVTLINPHRAQYEAMPFQEAVKE-----TQEREPMSVLAVDDNPANLKLIKTLLK 706

Query: 840 KLNLQPDTACNGEEALEAIKTQPYDLVLMDCEMPVLDGFQATQQLREWEARNGRSRTPVV 899
           +L  Q     NG+EA+E  K + +DL+ MD +MP  DGF AT+Q+RE         TP+V
Sbjct: 707 ELVTQVTVTDNGQEAVEIAKAKSFDLIFMDIQMPGTDGFSATKQIREHSLNR---NTPIV 763

Query: 900 ALTAHILSEHRERAREAGMDGHMAKPVELSHLRELIDHW 938
           A+TAH ++E RER  ++GMDG++ KP++ + L+ +I  W
Sbjct: 764 AVTAHAIAEERERIDQSGMDGYLPKPIDEAALKSVISRW 802